Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq18 367 4e-98 >seq18 Length=4127411 Score = 367 bits (406), Expect = 4e-98 Identities = 651/930 (70%), Gaps = 41/930 (4%) Strand=Plus/Minus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| ||||| | |||||||| || || ||| |||||||||||||||||||||||||| Sbjct 1143854 GCAGGTCAAGTCGAAGATCCTAGAACGCATGCAAGAATGGACGGAGATGTTCGCCAGTAA 1143795 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGT--GT 119 ||| ||| | || |||||||| || || || |||| || ||||| || ||| | || Sbjct 1143794 CCCAGATTTCGGAATCATGGAACAAGCATACATGAAACTGAAGACTCAGAGTAAGATCGT 1143735 Query 120 GATCAACTCTGGTTCGTTGG-GAGCA-CTGACCAACGTGTTGTAGACCCTAACCTGCGAC 177 | || | || | ||||| ||| | || || | | | |||||| ||||||| | Sbjct 1143734 TAGCAGTTATGAAT-GTTGGAGAGAAGCTCACTATCTT-----AGACCCGAACCTGCAGC 1143681 Query 178 CTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGG 237 | ||||| || || |||| | || || || | || ||||| ||||||||||||| Sbjct 1143680 CACCGTCCAAGCCCGGGAAGCGGGAAATTACCGATGCAGATCGCCAAAAGGAAGAGGAGG 1143621 Query 238 AGCTACAGATGGCGCTGGCACTCTCCGTCA-AGGAAAG--CGGGACCGAGCCATCCGCCG 294 |||| || ||||| || ||||| || | | || |||| | || || || | ||||| Sbjct 1143620 AGCTGCAAATGGCCCTCGCACTTTCGATAAGAGAAAAGGCCACGATCGCCCC-TGCGCCG 1143562 Query 295 CCAGGTCCAACCAGCCGCAAGCAAAAGCCCCA--CAACAATCCGCCCCGGAACAAGA-GC 351 | | | ||||| || || || ||| |||| | | | || || | || Sbjct 1143561 CAGCCTGAAGCCAGCTCCA-GCGCT-GCTCCAGTCAACCAAACTCA--GGCACCTGCTGC 1143506 Query 352 AGCATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCT 409 | || |||| | | || || || | || || || || || ||||| | ||||| Sbjct 1143505 CACCTCCCAAGCAGTCCCGTCGGGTACTTCGGCCGCCACAGTGTCGCGCGTGAGAGCCCT 1143446 Query 410 TTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGC 469 | |||||| ||| || |||||||| || ||| |||||||| || || | || || Sbjct 1143445 GTTCGACTTTCAGCCTTCAGAACCCGGTGAATTGCAGTTCCGCAAGGGAGATGTCATCGC 1143386 Query 470 GGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCAT 529 || |||||||| || |||||||| |||||||||||||| || | || ||||||||||| Sbjct 1143385 TGTCCTCGAGTCCGTCTACAAGGATTGGTGGAAGGGTTCCTTGAGAGGCCAGACCGGCAT 1143326 Query 530 CTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGA 589 ||||||||| ||||| |||||||| || | || || || ||||||| | || | || Sbjct 1143325 CTTCCCCCTTAACTACGTCGAGAAACTTCCTGACCCGACGGTGGAGGAGTTGCAGCGGGA 1143266 Query 590 AGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCT 649 ||| |||||||| || || || || | |||| || || ||||| |||||| | |||| Sbjct 1143265 AGCCCAGATGGAAGCCGATGTTTTCGGTCAGATTAAAAATGTGGAAAAGCTGTTGACTCT 1143206 Query 650 GCTGAGCACTAGTTCGAGTGCCGACGCT-------AGGGACAATGAGGAGATCACTTCGC 702 ||||||||| | ||| |||| ||| ||||||||| || ||||| | | Sbjct 1143205 TCTGAGCACTCG---GAGCTCCGA-GCTGAATGTGCAGGACAATGAAGAAATCACGGCCC 1143150 Query 703 TGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGC 762 |||| ||| ||| || | || || || ||| |||| ||||||||||| || || |||| Sbjct 1143149 TGTATCACTCTACATTGGCCATTCGCCCCAAGCTGATTGAGCTCATTGGAAAATACTCGC 1143090 Query 763 AAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCC 822 | || ||||||||| || || || | || | | || || || || | || | Sbjct 1143089 AGAAAAAGGGTAAGATGA-----TTTCG-GCATGTCGCTATTCTCCGCTAAT-GCTTTGC 1143037 Query 823 AGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCT 882 ||| || |||||||||||||||||||||||||||||||| || | || ||||| | || Sbjct 1143036 AGACGAGTTCACGCAGCTCAACGAGAAGTTCATCAAGGCGCGGAGAGATTACGAGTCTCT 1142977 Query 883 CCTTGAAGCCTCGATGTCGCAACCAGCGCA 912 || || || || ||| |||| ||||| || Sbjct 1142976 GCTGGAGGCGTCCATGGCGCACCCAGCACA 1142947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945595988685