Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2 372 1e-99 >seq2 Length=3801342 Score = 372 bits (412), Expect = 1e-99 Identities = 662/956 (69%), Gaps = 76/956 (8%) Strand=Plus/Minus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| ||||||||||||| || ||||||||| || ||||| |||||||| | ||||| Sbjct 696899 GCAGGTCAAGGCAAAGATTCTAGAGCGTATGCAAGAGTGGACTGAGATGTTTTCAAGTAA 696840 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121 ||| || | |||||||||||||| || || |||| | | |||||||| ||| || Sbjct 696839 CCCAGACTTCGGCATCATGGAGCAAGCATACATGAAGTTAAAGACACAGAGTAAGT---- 696784 Query 122 TCAACTCTGGTTCGTTG----GGAGCACTGA---CCAACGTGTT------GTAGACCCTA 168 || | ||| |||| | || ||| | | ||||| | |||||||| | Sbjct 696783 -CACCGATGGAGAGTTGCATTGAAGGACTCATTACTAACGTTCTAATCGCGTAGACCCGA 696725 Query 169 ACCTGCGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGG 228 |||||| || || || || || |||||| |||| |||||| |||| |||||||||| Sbjct 696724 ACCTGCAGCCCCCTTCAAAGCCCGTGAAGACAGAGATAACGGACGCGGATCGCCAGAAGG 696665 Query 229 AAGAGGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAA--------GCGGGAC 280 |||| ||||| | || ||||||||||| ||||| | | |||| | || | Sbjct 696664 AAGAAGAGGAATTGCAAATGGCGCTGGCGCTCTCGATTAGAGAAAAGAATCCTGTGGCTC 696605 Query 281 C-GAGCCAT--CCGCCGCCAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGC 337 | |||||| ||| | || || | ||||| || ||||| || Sbjct 696604 CTGAGCCACAGCCGGAGTCAAGTACTTCCAGC-----GCT---GCCCCTG------CCAG 696559 Query 338 CCCGGAACAAG----AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCT 393 || || ||||| |||| ||||| || || | ||||| ||| | || || || |||| Sbjct 696558 CCAGGCACAAGCCCCAGCA-CATCAGGCGGTTCCTTCTGGTACCTCTGCTGCCACTGTCT 696500 Query 394 CCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCA 453 | || || | || || || |||||| ||| || ||||| ||||| | || |||| Sbjct 696499 CACGAGTCAGGGCGCTCTATGACTTCCAGCCTTCAGAACCAGGCGAACTACAATTTCGCA 696440 Query 454 AAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGC 513 ||||||| | ||||| || |||||||| ||||| ||||| ||||||||||| ||||| Sbjct 696439 GAGGCGACGTCATTGCAGTGCTCGAGTCCGTGTATAAGGATTGGTGGAAGGGCTCTCTAA 696380 Query 514 GTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGG 573 | || || || ||||||||||||||||||||||| || ||||| | || || || | Sbjct 696379 GAGGGCAAACAGGCATCTTCCCCCTCAACTATGTTGAAAAGCTACCTGACCCCACAGTTG 696320 Query 574 AGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGG 633 | ||| | || | |||||||||||||| | || || || | |||| |||||||| | Sbjct 696319 AAGAGTTACAGCGCGAAGCTCAGATGGAAGGCGAGGTGTTCGGCCAGATAAAGAACGTTG 696260 Query 634 AGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCG------ACGCTAGGGACAATG 687 ||||||| | | || || ||||| || ||| ||| ||| | ||| |||| Sbjct 696259 AGAAGCTATTGACACTCCTCAGCACGCGT---AGTACCGAACCAAACGTTCAGGATAATG 696203 Query 688 AGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCA 747 |||| ||||| | ||||||||| || || | || || || ||| |||| ||||||| Sbjct 696202 AGGAAATCACGGCCCTGTACCACTCCACTTTGGCAATTCGACCTAAGCTGATTGAGCTCA 696143 Query 748 TTGGCAAGTATTCGCAAAAGAAGGGTA-----AGTGGAATCTTTTACGCGAATTT--GTG 800 | ||||| ||||| || || || |||| ||||| | |||| ||| || Sbjct 696142 TCGGCAAATATTCTCAGAAAAAAGGTATAATCGCTGGAAAC---TACG----TTTCAGTT 696090 Query 801 TGTTGGCCACTGAT-CGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAG 859 ||| | ||||| ||| || |||||| ||||| || ||||| ||||||||||| || Sbjct 696089 CGTTAG---CTGATGCGT-ATCAAGATGAATTCACCCAACTCAATGAGAAGTTCATTAAA 696034 Query 860 GCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 || | || ||||| ||| | ||||| || || || |||||||| || || ||||| Sbjct 696033 GCGAGACGGGACTATGAATCTCTCCTGGAGGCATCCATGTCGCACCCCGCCCAGCC 695978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945586570815