Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq673 302 1e-78 >seq673 Length=8497 Score = 302 bits (334), Expect = 1e-78 Identities = 649/952 (68%), Gaps = 61/952 (6%) Strand=Plus/Plus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| | || | |||||||| || |||||| ||||||||||| |||||||| ||||| Sbjct 1460 GCAGGTGAAATCCAAGATCCTGGAACGTATGCAGGAATGGACGGAAATGTTCGCTAGTAA 1519 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGT-- 119 ||| ||| | || |||||||| || |||||||||| | | ||||| || ||| || | Sbjct 1520 CCCGGATTTCGGGATCATGGAACAAGCCTATATGAAGTTAAAGACCCAGAGTAAGTTTTA 1579 Query 120 ---GATCAACTCTGGTTCGTTGGGA-GCA-CTGACCAAC-GTGTTGTAGACCCTAACCTG 173 || ||| | ||| | |||| || || || | ||| |||||| ||||| Sbjct 1580 CGAGACCAAGTTTGGGT-GTTGTCTTGCGGCTTACAATTTGTGAAACAGACCCCAACCTA 1638 Query 174 CGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAG 233 | |||||| ||||| ||| || | | ||||| || ||||| || || |||||| Sbjct 1639 CAACCTCCATCGAAGCCTGGCAAAAGGGAAATCACCGATGTAGACCGTCAAAAAGAAGAG 1698 Query 234 GAGGAGCTACAGATGGCGCTGGCACTCTCCGTCA-AG-GAAAGC-------GGGACCGAG 284 ||||| | |||||||| || ||||| || ||| || |||| | | ||||| Sbjct 1699 GAGGAATTGCAGATGGCCCTCGCACTTTCTATCAGAGAGAAACCTTCTACTGCTCCCGAG 1758 Query 285 CCATCCGCCGCCAGGTCCAACCA-GCCGCAAGCAAAAGC-CCCACAA-CAATCCGCCCCG 341 || || | || | | | || || | || ||||||| | || | | Sbjct 1759 CCTAAGGCTGAA---TCTAGCAATGCTGCCGGG----GCTCCCACAAACCATGCAC---- 1807 Query 342 GAACAAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTT 401 | | || ||| || || || | || || ||| | || ||||| ||||| || || Sbjct 1808 -AGCCAGTGCAATCCCAGGCAGTTCCCTCGGGTACCTCTGCTGCTACTGTCTCACGGGTC 1866 Query 402 CGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGAC 461 | || || | ||| ||| || || || ||||| || || |||||| |||| || Sbjct 1867 AGAGCACTCTTCGATTTCCAACCGTCAGAGCCCGGTGAATTACAGTTCCGCCAAGGAGAT 1926 Query 462 ATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAG 521 | ||||| || || || || || || |||||||||||||||||||| ||| | || || Sbjct 1927 GTCATTGCCGTCCTTGAATCGGTTTATAAGGACTGGTGGAAGGGTTCCCTGAGAGGCCAA 1986 Query 522 ACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTC 581 || || |||||||| || ||||||||||||||||| | |||||||| |||||||| Sbjct 1987 ACTGGAATCTTCCCTCTGAACTATGTCGAGAAGCTTCCTGATCCTACGGCCGAGGAGCTT 2046 Query 582 GAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTG 641 | | |||||||| |||||| | || || || | ||||||| || || ||||||||| Sbjct 2047 CAACGTGAAGCTCATATGGAGTCCGAGGTGTTCGGCCAGATCAAAAATGTCGAGAAGCTG 2106 Query 642 CTAGCTCTGCTGAGCACTAGTTCGAGTGCCGAC--------GCTAGGGACAATGAGGAGA 693 || | || ||||||||| | | | | | ||| || | || || || || | Sbjct 2107 TTAACACTTCTGAGCACTCG--CAACT-CAGACTTGAATGTGCAA--GATAACGAAGAAA 2161 Query 694 TCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCA 753 |||| | |||||||| || || |||| || |||||| |||| || || ||||||| Sbjct 2162 TCACCACTTTGTACCACTCAACCTTGGCGATTCGCCCGAAGCTGATTGAACTTATTGGCA 2221 Query 754 AGTATTCGCAAAAGAAGGGTAAGTGGAATCTTTTAC--GCGAAT------TTGTGTGTTG 805 | ||||| ||||||||||||| || || || || | ||| || | ||| | Sbjct 2222 AATATTCACAAAAGAAGGGTA--TGTTATTGTTGACTTCCCAATGTGTCCTTCTTTGTGG 2279 Query 806 GC-CACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACG 864 || ||| ||| || |||||| ||||| || ||||| || ||||| ||||| || || Sbjct 2280 GCTCACGGAT----TTGTAGATGAATTCACTCAACTCAATGAAAAGTTTATCAAAGCTCG 2335 Query 865 CCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCC 916 | ||||| ||| | || | ||||| || ||||| || || ||||||||| Sbjct 2336 GAGGGACTATGAATCTCTTTTAGAAGCTTCAATGTCTCACCCTGCGCAGCCC 2387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944871510315