Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq377 289 9e-75 >seq377 Length=303453 Score = 289 bits (320), Expect = 9e-75 Identities = 632/927 (68%), Gaps = 37/927 (4%) Strand=Plus/Minus Query 15 AAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGATCTTGGC 74 ||| |||| |||||||||| || ||||| |||||||||||||||||||| ||| ||||| Sbjct 29019 AAGGTCCTGGAGCGTATGGAAGATTGGACAGAGATGTTCGCCAGTAACCCAGATTTTGGC 28960 Query 75 ATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAACTCTGGTTC 134 || ||||| || || || |||| | ||||| |||||| |||| | | | || || Sbjct 28959 ATTATGGAACAAGCGTACATGAAATTGAAGACTCAAAGTACGTGG--TGCATTGTGTTTT 28902 Query 135 G------TTGGGAGCA-CTGACCAACGTGTT-GTAGACCCTAACCTGCGACCTCCGTCGA 186 || |||| || || | | || | |||||||||||| | ||| ||||||| Sbjct 28901 TGAAGAATTCTCAGCAGCTAACAAGTCTATTCGCAGACCCTAACCTCCAACCCCCGTCGA 28842 Query 187 AACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACAGA 246 | || |||| | || || || ||| || ||||| || || |||||| |||| | Sbjct 28841 AGCCCGGGAAGCGAGAAATTACCGATGTGGATCGTCAGAAAGAGGAAGAGGAGTTACAAA 28782 Query 247 TGGCGCTGGCACTCTCCGTCAAGGA-AAGCGGG-ACCGAGCCATCCGCCGCCAGGTCCA- 303 ||||||| || || ||| | | ||| |||| | || ||| || || | ||| | | Sbjct 28781 TGGCGCTTGCCCTTTCCATAAGGGAGAAGCCCACAGCGGGCCTTCAACCAC-AGGCCGAG 28723 Query 304 ACCAGCCGCA-AGCAAAAGCCCCACAACAATCCGCCCCGGAACAAG-AGCAGCATCAAG- 360 | |||| || ||| ||| || || |||| | ||||| |||| | | | Sbjct 28722 AGCAGCAGCTCAGCTGCAGCGCCGGAA-AATCAAAC-----ACAAGTAGCACCTGCCGGA 28669 Query 361 CTATTGCAT-CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTC 419 | | ||| | | || || | | ||||| || || | || | || || ||||||||| Sbjct 28668 CCAGTGCTTTCGGGTACTTCTGTTGCTACTGTATCTAGGGTCAGGGCGCTGTACGACTTC 28609 Query 420 ACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAG 479 ||| || || || || ||| | ||||| || || || | ||||| || |||||| Sbjct 28608 CAGCCGTCCGAGCCGGGGGAGCTACAGTTCCGGAAGGGGGATGTCATTGCTGTCCTCGAG 28549 Query 480 TCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTC 539 || ||||| ||||| ||||||||||| || ||| | || || || || |||||||| ||| Sbjct 28548 TCCGTGTATAAGGATTGGTGGAAGGGCTCCCTGAGAGGTCAAACTGGAATCTTCCCTCTC 28489 Query 540 AACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATG 599 ||||| || |||||||| | || || || || ||||| || | |||||||| ||| Sbjct 28488 AACTACGTTGAGAAGCTTCCAGACCCCACTGTCGAAGAGCTTCAGCGTGAAGCTCAAATG 28429 Query 600 GAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC- 658 |||| || || |||| |||||||||| || |||||||| | |||| || ||||| Sbjct 28428 GAGGGAGATGTGTTTGGCCAGATCAAGAATGTTGAGAAGCTATTGACTCTTCTAAGCACG 28369 Query 659 --TAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACA 716 | ||| | | | | ||||||||||| || || |||| | |||| Sbjct 28368 CGCAACTCGGAACTCAATGTTCAAGACAATGAGGAAATAACGAATTTGTATAATTCGACA 28309 Query 717 GTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG 776 | || || || |||||| |||| || |||||||| |||||||| || || ||||||| | Sbjct 28308 CTATCCATTCGTCCGAAGCTGATTGAACTCATTGGAAAGTATTCACAGAAAAAGGGTATG 28249 Query 777 ---TGGAATCTTTTACGCGAAT-TTGTGTGTTGGCC----ACTGATCGTGTTCCAGATGA 828 | | | || | | | | ||||| || ||| | | | ||||||| Sbjct 28248 CTATTCTCTATATTCCTCCAGTCACCAGTGTT--CCATTAACTCACTGCAATGCAGATGA 28191 Query 829 TTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGA 888 || || ||||||||||||||||||||||| || || | ||||||||| | || | || Sbjct 28190 ATTTACCCAGCTCAACGAGAAGTTCATCAAAGCGCGAAGGGACTACGAATCTCTGTTGGA 28131 Query 889 AGCCTCGATGTCGCAACCAGCGCAGCC 915 ||| || ||| | ||||| ||||| || Sbjct 28130 AGCTTCCATGACTCAACCCGCGCAACC 28104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945433268820