Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq61 161 3e-36 >seq61 Length=153321 Score = 161 bits (178), Expect = 3e-36 Identities = 208/287 (72%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || || || ||| ||| || |||||| | || || |||| || || | Sbjct 5580 CTGGCACAACTGCCGCGACTGTCAGCCGAGTGCGCGCCTTGTATGATTTCATCCCATCTG 5639 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | | || ||| | | ||| || || ||| | ||||| ||| | ||| ||||| | Sbjct 5640 AGGCTGGGGAGCTTGAGTTCAAGAAGGGAGACGTGATTGCTGTTTTGGAGAGCGTGTATA 5699 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 | ||||||||| || |||||| || |||| || || |||||| | || || |||| Sbjct 5700 AAGACTGGTGGCGTGGGTCTCTGAAGGGGAAGACGGGTATTTTCCCCTTGAATTACGTCG 5759 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 | |||||| ||| ||||| || ||||| |||| || || ||||||||||| |||| Sbjct 5760 ATAAGCTGGCGGACCCTACGCCTGATGAGCTACAGAGGGAGGCGCAGATGGAGGCAGAAG 5819 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 | ||||||||||||||||| || |||||| |||| | ||||||||| Sbjct 5820 TATTTGCGGAGATCAAGAATGTCGAGAAGTTGCTGACGCTGCTGAGC 5866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945480009360