Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq145 149 2e-32
>seq145
Length=35671
Score = 149 bits (164), Expect = 2e-32
Identities = 234/331 (71%), Gaps = 7/331 (2%)
Strand=Plus/Plus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
|||| || || || || || || ||| || |||||| | || || ||| || || |
Sbjct 20400 CTGGCACAACTGCCGCGACAGTTAGCCGAGTGCGCGCCTTGTATGATTTCGTCCCATCCG 20459
Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489
| |||| || | | ||| || || ||| | ||||| ||| | ||| ||||| |
Sbjct 20460 AGGCCGGGGAACTTGAGTTCAAGAAGGGAGACGTGATTGCTGTTTTGGAGAGCGTGTATA 20519
Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549
| ||||||||| || |||||| || |||| || || ||||| | || || ||||
Sbjct 20520 AAGACTGGTGGCGTGGCTCTCTGAAGGGCAAGACGGGTATTTTCCCTTTGAATTACGTCG 20579
Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609
| |||||| ||||||||| || ||||| |||| || || ||||||||||| || |
Sbjct 20580 ACAAGCTGGCGGATCCTACGCTTGATGAGCTGCAGAGGGAGGCGCAGATGGAGGCAGAGG 20639
Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAG-- 667
| ||||||||||||||||| || |||||| |||| | ||||||||| | || | |
Sbjct 20640 TATTTGCGGAGATCAAGAATGTCGAGAAGTTGCTGACGCTGCTGAGCGC--GTCCAACAC 20697
Query 668 TGC-CGACGCTAGG--GACAATGAGGAGATC 695
||| | || ||| |||||||||||||||
Sbjct 20698 TGCTCCTCGTGAGGAGGACAATGAGGAGATC 20728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945123351135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |