Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq145 149 2e-32 >seq145 Length=35671 Score = 149 bits (164), Expect = 2e-32 Identities = 234/331 (71%), Gaps = 7/331 (2%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || || || || ||| || |||||| | || || ||| || || | Sbjct 20400 CTGGCACAACTGCCGCGACAGTTAGCCGAGTGCGCGCCTTGTATGATTTCGTCCCATCCG 20459 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | |||| || | | ||| || || ||| | ||||| ||| | ||| ||||| | Sbjct 20460 AGGCCGGGGAACTTGAGTTCAAGAAGGGAGACGTGATTGCTGTTTTGGAGAGCGTGTATA 20519 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 | ||||||||| || |||||| || |||| || || ||||| | || || |||| Sbjct 20520 AAGACTGGTGGCGTGGCTCTCTGAAGGGCAAGACGGGTATTTTCCCTTTGAATTACGTCG 20579 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 | |||||| ||||||||| || ||||| |||| || || ||||||||||| || | Sbjct 20580 ACAAGCTGGCGGATCCTACGCTTGATGAGCTGCAGAGGGAGGCGCAGATGGAGGCAGAGG 20639 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAG-- 667 | ||||||||||||||||| || |||||| |||| | ||||||||| | || | | Sbjct 20640 TATTTGCGGAGATCAAGAATGTCGAGAAGTTGCTGACGCTGCTGAGCGC--GTCCAACAC 20697 Query 668 TGC-CGACGCTAGG--GACAATGAGGAGATC 695 ||| | || ||| ||||||||||||||| Sbjct 20698 TGCTCCTCGTGAGGAGGACAATGAGGAGATC 20728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945123351135