Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq106 300 5e-78 >seq106 Length=763196 Score = 300 bits (332), Expect = 5e-78 Identities = 411/571 (72%), Gaps = 21/571 (4%) Strand=Plus/Plus Query 351 CAGCATCAAGCTATTGC---ATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCC 407 |||| ||||||| ||| | || || ||||| || || ||| ||| || || Sbjct 737049 CAGCCTCAAGCTGATGCCCAACAAGGCACGACAGCCGCCACTGTCAGCCGAGTCAAGGCT 737108 Query 408 CTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATT 467 || |||||||||| || || || || || ||| |||| || || ||||| | ||| Sbjct 737109 CTCTACGACTTCATTCCTTCTGAGCCTGGTGAGCTGGCCTTTAAGAAGGGCGATGTCATT 737168 Query 468 GCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGC 527 || || | || || || ||||||||||||||||| || ||| ||||||||||||| || Sbjct 737169 GCCGTGATTGAATCGGTATACAAGGACTGGTGGAAAGGATCTTTGCGTGGACAGACTGGT 737228 Query 528 ATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGA 587 |||||||| || ||||| || || |||||||| |||||||| | |||||||| || ||| Sbjct 737229 ATCTTCCCGCTGAACTACGTTGAAAAGCTGCAAGATCCTACGAGAGAGGAGCTTGAAAGA 737288 Query 588 GAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCT 647 || ||||||| |||||||| ||||| | | |||| ||| || |||||| || | ||| Sbjct 737289 GATGCTCAGACCGAGGCGGATGTCTTCTCACAAATCAGGAATGTCGAGAAGTTGTTGGCT 737348 Query 648 CTGCTGAGCACTAGTTCGAGTGCCGACGCTAGGGACA---------ATGAGGAGATCACT 698 |||||||| || | | | || | |||||| | || ||||||||| Sbjct 737349 CTGCTGAGTGTCAG---GGGAGAGAACTCGCGGGACACAGGCAGCGAAGACGAGATCACT 737405 Query 699 TCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTAT 758 |||||| || |||| |||| || || || |||||||| |||||||| || || || Sbjct 737406 GATCTGTACAACCAGACCTTGTCAATTCGACCCAAGTTGATTGAGCTCATCGGAAAATAC 737465 Query 759 TCGCAAAAGAAGGGTAAGTGGAATCTTTTAC--GCGAATTTGTGTGTTGGCCACTGATCG 816 ||||| ||||||||| ||| | ||| || | || | | | || ||||| || Sbjct 737466 TCGCAGAAGAAGGGTGAGTTG---CTTGAACATGTGAGAGCGAGAATCGGAGACTGA-CG 737521 Query 817 TGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGA 876 | ||||||| ||||||||||| |||||||||||||||||||| || || || ||||| Sbjct 737522 TTCGACAGATGAGTTCACGCAGCTGAACGAGAAGTTCATCAAGGCTCGTCGTGATTACGA 737581 Query 877 AACCCTCCTTGAAGCCTCGATGTCGCAACCA 907 | |||| | ||| | || ||||| |||||| Sbjct 737582 AGCCCTTTTGGAATCATCCATGTCACAACCA 737612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945570874365