Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq3748 269 8e-69
>seq3748
Length=11706
Score = 269 bits (298), Expect = 8e-69
Identities = 642/958 (67%), Gaps = 68/958 (7%)
Strand=Plus/Minus
Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68
||||| ||||| || ||||| |||| || ||||| |||||||| | || || |||||
Sbjct 2608 AAGGCGAAGATACTAGAGCGGATGGAAGAGTGGACAGAGATGTTTTCTAGCAATCCTGAC 2549
Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGT--------GTG 120
| || || ||||||||||| ||| ||| ||| ||| ||||||||| || ||
Sbjct 2548 TTGGGTATTATGGAGCAGGCTTATGTGAAGCTCAAGTCACAAAGTGAGTAGACGGCTGTC 2489
Query 121 AT----CAACTCTG------------GTTCGTTGGGAGCACT-GACCAACGTGTTGT--- 160
| ||||| | ||||||| || | ||| |||||
Sbjct 2488 TTGTGCCAACTTTTCTAGAGCGCTCTGTTCGTTACTGTTTCTTGTTTAACAGGTTGTTTA 2429
Query 161 ------AGACCCTAACCTGCGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTC 214
||| || || || | ||| || |||||||| |||| || || || || |
Sbjct 2428 TTTAACAGATCCAAATCTTCAACCACCATCGAAACCAACGAAGCGGCAAATTACCGATTT 2369
Query 215 GGACCGCCAGAAGGAAGAGGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAG 274
||||| |||||||| |||||||| || ||||||||||| ||| | || | ||||| |
Sbjct 2368 TGACCGGCAGAAGGAGGAGGAGGAACTTCAGATGGCGCTCGCATTATCTATTAAGGATAA 2309
Query 275 CGGGACCGAGCCATCCGCCGCCAGGTCCAAC-CAGCCGCA-AGCAAAAGCCCCACAACAA 332
| | | ||| | || | |||| | | || ||| | | || | |
Sbjct 2308 ----ATCTT--CTTCCTCGACCCAGAACAACACCACTACACAGCGTACGACCAGTCAGGA 2255
Query 333 TCCGCCCCGGAACAAGA--GCAGCATCA-AGC-TATTGCATCTGGAACCACAGCAGCTAC 388
| ||| || | || ||| |||| ||| | || |||| || || || ||||| ||
Sbjct 2254 TA-GCCAGGG--CCAGCCTGCACCATCCCAGCCTCTTCCATCAGGTACTACCGCAGCCAC 2198
Query 389 CGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTT 448
||| || || ||||| ||||| || ||||| ||| ||||| ||||| || | ||
Sbjct 2197 CGTTTCTCGGGTTCGAGCCCTATATGACTTTCAGCCTTCGGAGCCCGGGGAACTCCAGTT 2138
Query 449 CCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTC 508
||||||||||||| |||||||||| ||||| ||||| ||||| || |||||||| |||||
Sbjct 2137 CCGCAAAGGCGACGTTATTGCGGTGCTCGAATCTGTTTACAAAGATTGGTGGAAAGGTTC 2078
Query 509 TCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTAC 568
|||||| || || ||||| ||||||||||| |||||||||||||| || |||||| ||
Sbjct 2077 TCTGCGGGGCCAAACCGGAATCTTCCCCCTGAACTATGTCGAGAAACTATCGGATCCCAC 2018
Query 569 CAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAA 628
| | ||||||||| | ||||||||||| |||||||| ||||| || || || || || ||
Sbjct 2017 CCAAGAGGAGCTCCAAAGAGAAGCTCAAATGGAGGCTGAAGTTTTCGCCGAAATAAAAAA 1958
Query 629 CGTGGAGAAGCTGCTAGCTCTGCTGAGCACT---AGTTC-GAGTGCCGACGCTAGGGACA 684
|| || || || | | || |||||||| ||||| || | ||| | || |
Sbjct 1957 TGTAGAAAAACTATTGACACTTTTGAGCACTAGCAGTTCAGAAT-TGAACGTTCAAGAGA 1899
Query 685 ATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGC 744
| || || ||||| | || || || || | | ||||| || || | || ||
Sbjct 1898 ACGACGAAATCACAACTCTATATCATTCTACCCTAGCCATACGCCCAAAACTTATTGAAT 1839
Query 745 TCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCT---TTTACGCGAATTTGT-- 799
| ||||| ||||| || || ||||| ||| ||| || | ||| || | || |
Sbjct 1838 TGATTGGAAAGTACTCACAGAAGAAAGGTGAGT---ATTTCGATTTGAGCCATTTCCTCA 1782
Query 800 ---GTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATC 856
| || | || | | | || ||| || || || || || || || |||||||||
Sbjct 1781 ACCCTCTTTG---CTAACCCTCTTGAAGACGACTTTACCCAACTTAATGAAAAGTTCATC 1725
Query 857 AAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGC 914
|| || || | ||||||||| |||| || || ||||| ||| | || ||| | ||||
Sbjct 1724 AAAGCTCGAAGAGACTACGAATCCCTTCTAGAGGCCTCCATGGCTCATCCATCTCAGC 1667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944925401460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |