Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3748 269 8e-69 >seq3748 Length=11706 Score = 269 bits (298), Expect = 8e-69 Identities = 642/958 (67%), Gaps = 68/958 (7%) Strand=Plus/Minus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||||| ||||| || ||||| |||| || ||||| |||||||| | || || ||||| Sbjct 2608 AAGGCGAAGATACTAGAGCGGATGGAAGAGTGGACAGAGATGTTTTCTAGCAATCCTGAC 2549 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGT--------GTG 120 | || || ||||||||||| ||| ||| ||| ||| ||||||||| || || Sbjct 2548 TTGGGTATTATGGAGCAGGCTTATGTGAAGCTCAAGTCACAAAGTGAGTAGACGGCTGTC 2489 Query 121 AT----CAACTCTG------------GTTCGTTGGGAGCACT-GACCAACGTGTTGT--- 160 | ||||| | ||||||| || | ||| ||||| Sbjct 2488 TTGTGCCAACTTTTCTAGAGCGCTCTGTTCGTTACTGTTTCTTGTTTAACAGGTTGTTTA 2429 Query 161 ------AGACCCTAACCTGCGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTC 214 ||| || || || | ||| || |||||||| |||| || || || || | Sbjct 2428 TTTAACAGATCCAAATCTTCAACCACCATCGAAACCAACGAAGCGGCAAATTACCGATTT 2369 Query 215 GGACCGCCAGAAGGAAGAGGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAG 274 ||||| |||||||| |||||||| || ||||||||||| ||| | || | ||||| | Sbjct 2368 TGACCGGCAGAAGGAGGAGGAGGAACTTCAGATGGCGCTCGCATTATCTATTAAGGATAA 2309 Query 275 CGGGACCGAGCCATCCGCCGCCAGGTCCAAC-CAGCCGCA-AGCAAAAGCCCCACAACAA 332 | | | ||| | || | |||| | | || ||| | | || | | Sbjct 2308 ----ATCTT--CTTCCTCGACCCAGAACAACACCACTACACAGCGTACGACCAGTCAGGA 2255 Query 333 TCCGCCCCGGAACAAGA--GCAGCATCA-AGC-TATTGCATCTGGAACCACAGCAGCTAC 388 | ||| || | || ||| |||| ||| | || |||| || || || ||||| || Sbjct 2254 TA-GCCAGGG--CCAGCCTGCACCATCCCAGCCTCTTCCATCAGGTACTACCGCAGCCAC 2198 Query 389 CGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTT 448 ||| || || ||||| ||||| || ||||| ||| ||||| ||||| || | || Sbjct 2197 CGTTTCTCGGGTTCGAGCCCTATATGACTTTCAGCCTTCGGAGCCCGGGGAACTCCAGTT 2138 Query 449 CCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTC 508 ||||||||||||| |||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct 2137 CCGCAAAGGCGACGTTATTGCGGTGCTCGAATCTGTTTACAAAGATTGGTGGAAAGGTTC 2078 Query 509 TCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTAC 568 |||||| || || ||||| ||||||||||| |||||||||||||| || |||||| || Sbjct 2077 TCTGCGGGGCCAAACCGGAATCTTCCCCCTGAACTATGTCGAGAAACTATCGGATCCCAC 2018 Query 569 CAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAA 628 | | ||||||||| | ||||||||||| |||||||| ||||| || || || || || || Sbjct 2017 CCAAGAGGAGCTCCAAAGAGAAGCTCAAATGGAGGCTGAAGTTTTCGCCGAAATAAAAAA 1958 Query 629 CGTGGAGAAGCTGCTAGCTCTGCTGAGCACT---AGTTC-GAGTGCCGACGCTAGGGACA 684 || || || || | | || |||||||| ||||| || | ||| | || | Sbjct 1957 TGTAGAAAAACTATTGACACTTTTGAGCACTAGCAGTTCAGAAT-TGAACGTTCAAGAGA 1899 Query 685 ATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGC 744 | || || ||||| | || || || || | | ||||| || || | || || Sbjct 1898 ACGACGAAATCACAACTCTATATCATTCTACCCTAGCCATACGCCCAAAACTTATTGAAT 1839 Query 745 TCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCT---TTTACGCGAATTTGT-- 799 | ||||| ||||| || || ||||| ||| ||| || | ||| || | || | Sbjct 1838 TGATTGGAAAGTACTCACAGAAGAAAGGTGAGT---ATTTCGATTTGAGCCATTTCCTCA 1782 Query 800 ---GTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATC 856 | || | || | | | || ||| || || || || || || || ||||||||| Sbjct 1781 ACCCTCTTTG---CTAACCCTCTTGAAGACGACTTTACCCAACTTAATGAAAAGTTCATC 1725 Query 857 AAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGC 914 || || || | ||||||||| |||| || || ||||| ||| | || ||| | |||| Sbjct 1724 AAAGCTCGAAGAGACTACGAATCCCTTCTAGAGGCCTCCATGGCTCATCCATCTCAGC 1667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944925401460