Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq25 1018 0.0
>seq25
Length=459457
Score = 1018 bits (1128), Expect = 0.0
Identities = 1002/1292 (78%), Gaps = 50/1292 (4%)
Strand=Plus/Minus
Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61
|||| ||||||| ||||| || ||||| ||||| || ||| | ||||||||| ||| |
Sbjct 273674 GCAGGTCAAGGCTAAGATTCTGGAGCGCATGGGCGAGTGGTCCGAGATGTTCTCCAAGGA 273615
Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121
||| ||||| ||||| ||||||||||| || |||||||| ||||| || ||| |||| |
Sbjct 273614 CCCGGATCTAGGCATAATGGAGCAGGCTTACATGAGGCTAAAGACGCAGAGTACGTGGCA 273555
Query 122 TCAACTCTGGTTCGTTGGGAGCACTGACCAACGTGTTGT------AGACCCTAACCTGCG 175
|| || ||| | | || | |||| || | || | | |||||| ||||| ||
Sbjct 273554 TCGACCCTGATCTGCTGCGT-CACTTACTGATTTGGTATTCCCGCAGACCCCAACCTCCG 273496
Query 176 ACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGA 235
||||| |||||||| || ||||| ||||||||||| || |||||||| |||||||| ||
Sbjct 273495 TCCTCCATCGAAACCGCAAAAGACTCAGATCACGGATTCAGACCGCCAAAAGGAAGAAGA 273436
Query 236 GGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCCGCCGC 295
|||||| || ||||| ||||| | || ||||||| | || ||| ||||| |||||
Sbjct 273435 GGAGCTTCAAATGGCCCTGGCCTTGTCAATCAAGGAGAACGCTACCTCACCATCGGCCGC 273376
Query 296 CAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAA--CAATCCGCCCCGGAACAAGAGCAG 353
|| ||||||||| || ||||||| | | ||| || | ||| | | ||||||||
Sbjct 273375 CAAGTCCAACCAACCCCAAGCAAGCTCGACTCAAGCCACTACGCAGCAG--CAAGAGCAA 273318
Query 354 CATCAA---GCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTT 410
|| || || ||||| || ||||| ||||| |||||||| |||||||| || || ||
Sbjct 273317 CAACACCAGGCCATTGCTTCCGGAACGACAGCCGCTACCGTATCCCGCGTCCGTGCTCTC 273258
Query 411 TACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCG 470
||||||||||||||||| || |||||||| |||||||||||||| || || || || ||
Sbjct 273257 TACGACTTCACGCCCTCCGAGCCCGGCGAATTGGCTTTCCGCAAGGGTGATATCATCGCA 273198
Query 471 GTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATC 530
||||||||||| || |||||||| ||||||||||| ||| ||||||||||||| |||||
Sbjct 273197 GTTCTCGAGTCAGTTTACAAGGATTGGTGGAAGGGCTCTTTGCGTGGACAGACGGGCATT 273138
Query 531 TTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAA 590
||||| ||||||||||| |||||| |||||||||| || ||||||||||| ||||||||
Sbjct 273137 TTCCCTCTCAACTATGTTGAGAAGTTGCAGGATCCGACGAAGGAGGAGCTGGAGAGAGAG 273078
Query 591 GCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTG 650
|| || |||||||| || || || ||||| |||||||||||||||||| |||| ||||||
Sbjct 273077 GCACAAATGGAGGCCGAGGTATTCGCGGAAATCAAGAACGTGGAGAAGTTGCTGGCTCTG 273018
Query 651 CTGAGCACTAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCAC 710
|||||||| | ||||| || || || || || |||||||||||||||||| |||| |||
Sbjct 273017 CTGAGCACCAACTCGAGCGCGGATGCGAGAGATAATGAGGAGATCACTTCGTTGTATCAC 272958
Query 711 AAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAG 770
||||| || |||||||||| |||||||||||||||||||| ||||| ||||| ||||||
Sbjct 272957 AAGACGGTTGCGATACGGCCAAAGTTGATCGAGCTCATTGGGAAGTACTCGCAGAAGAAG 272898
Query 771 GGTAA-----GTGGAATCTTTTACGCGAATTTGTGTGTTGGCCAC-----TGATCGTGTT 820
||| | || | || || ||| ||| | |||| | | |||
Sbjct 272897 GGTGAGTCTGGTTGTATTGTTCACG-GAACT----------CCACAAAGTTAACCGTTCC 272849
Query 821 CCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACC 880
|||||||||||||| ||| | |||||||||||||||||||| || ||||| ||||| |
Sbjct 272848 CCAGATGATTTCACACAGTTGAACGAGAAGTTCATCAAGGCTCGTCGCGATTACGAGGCT 272789
Query 881 CTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCGTCAACCCTATGGC 940
||||| ||||| |||||||||||| | |||||||| || || |||||||| || ||||||
Sbjct 272788 CTCCTCGAAGCTTCGATGTCGCAAGCCGCGCAGCCTGGTTATGGTCGTCAGCCTTATGGC 272729
Query 941 TACGGCGCCGGCGCCCCGCCGCCTCAGAGTGCTCCGTACGGTGGCTATCCTCCTCAAGGA 1000
||||| || || ||||| || || || |||||||| ||||| ||||||||||| ||||||
Sbjct 272728 TACGGTGCGGGTGCCCCTCCACCACAAAGTGCTCCATACGGCGGCTATCCTCCGCAAGGA 272669
Query 1001 CCTCCTCAG------------GAACAGTTTTACTCGCCTACTCCAGCCGCAGACCAAGGC 1048
||||| ||| || | || |||||| ||| ||| || ||||||||||||
Sbjct 272668 CCTCCGCAGGGACCTCCGCAAGACCGGTATTACTCACCTGGTCCGGCAGCAGACCAAGGC 272609
Query 1049 TACGGATATCCTCCTCAGAATGGGCCTCAGCCCTTCACGATGGCTCAGCCCTCACAAGCA 1108
|| || || || |||||||| || ||||||||||| | ||||| | || ||||||
Sbjct 272608 TATGGCTACCCACCTCAGAACGGACCTCAGCCCTTTATGATGGTTACTCCTGGACAAGCT 272549
Query 1109 CCTCCTTCTGCACAGGTGGCTAGTCCTAGACCAGCGAATGGCGAGC---TCTCCTACGTC 1165
|| || ||||||||||| | || || | || | || ||||| | | |||||||
Sbjct 272548 CCCCCGCCTGCACAGGTGACGAGCCCGAAGCCCGTTAACGGCGATCCCGCCGCCTACGTA 272489
Query 1166 CCGCAGCGCGTGCCTGTCGGTGGAAGGCCCACATCCATGGCCTTTCCCCAGGAAATGGCG 1225
|| |||||||| || || |||||||| ||| || ||||| ||||| ||||||||||||
Sbjct 272488 CCACAGCGCGTCCCCGTTGGTGGAAGACCCCAGTCGATGGCTTTTCCGCAGGAAATGGCG 272429
Query 1226 GCCAACAGCCCAGTGGACTCCAGGCCGCCTCC 1257
||||||||||| |||||| |||| || |||||
Sbjct 272428 GCCAACAGCCCTGTGGACACCAGACCCCCTCC 272397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945402224730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |