Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2 226 9e-56 >seq2 Length=4202288 Score = 226 bits (250), Expect = 9e-56 Identities = 221/285 (78%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || |||||||| ||||| ||| || |||||||| |||||||| |||||||||| Sbjct 1320480 GGTACTACAGCAGCGACCGTTAGCCGGGTACGCGCCCTCTACGACTTTGTGCCCTCGGAA 1320421 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||||||| | | ||| || |||||| | ||||| || || ||| ||| |||||| Sbjct 1320420 CCCGGCGAGCTTGAATTCAAAAAGGGCGACGTCATTGCTGTGCTGGAGAGTGTCTACAAG 1320361 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| |||||||| || || |||||||||||||||| |||||||| || ||| Sbjct 1320360 GATTGGTGGCGAGGTTCTCTCCGGGGCAAGACCGGCATCTTCCCTCTCAACTACGTTGAG 1320301 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||| || ||||| || ||| ||||| || | || || ||||||||||| |||||| Sbjct 1320300 AAGTTGGCTGATCCCACGGCGGATGAGCTGCAGCGTGAGGCCCAGATGGAGGCCGAAGTC 1320241 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 ||||| ||||||||||| || |||||| || | |||| ||||| Sbjct 1320240 TTTGCCGAGATCAAGAATGTTGAGAAGTTGTTGACTCTTTTGAGC 1320196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945513843930