Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq222 192 2e-45 >seq222 Length=218208 Score = 192 bits (212), Expect = 2e-45 Identities = 210/279 (75%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 378 ACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGC 437 || || || || || || ||||| || || || | |||||| ||| |||| || ||| | Sbjct 35266 ACGGCCGCCACGGTGTCGCGCGTGCGGGCGCTGTTCGACTTTACGGCCTCCGAGGCCGAC 35325 Query 438 GAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGG 497 ||| || | ||| || |||||| | || || || |||||||| || ||| |||||| Sbjct 35326 GAGCTGACGTTCAAAAAGGGCGACGTCATCGCCGTGCTCGAGTCGGTCTACCGCGACTGG 35385 Query 498 TGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTG 557 ||| || || ||||| || ||||| ||||||||||| |||||||| ||||||| ||| Sbjct 35386 TGGCGCGGCTCGCTGCGCGGCCAGACGGGCATCTTCCCGCTCAACTACGTCGAGATCCTG 35445 Query 558 CAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCG 617 ||| || || |||||||| ||| | || || ||||||||||| | || ||||| Sbjct 35446 GCGGACCCGACGCCCGAGGAGCTGGAGCGCGAGGCGCAGATGGAGGCACAGGTGTTTGCC 35505 Query 618 GAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 |||||||||||||| ||||||||||| | || |||||| Sbjct 35506 GAGATCAAGAACGTCGAGAAGCTGCTGACGCTCCTGAGC 35544 Score = 87.8 bits (96), Expect = 6e-14 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 |||| || ||||| || || ||||| |||||||||||||| |||||||||||||| ||| Sbjct 35763 CAGACGACTTCACCCAACTGAACGAAAAGTTCATCAAGGCCCGCCGCGACTACGAGGCCC 35822 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 | || || | || |||||||| || | |||||| |||| Sbjct 35823 TGCTCGAGTCGTCAATGTCGCACCCGCCCCAGCCCAACTAC 35863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945442337880