Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq222 192 2e-45
>seq222
Length=218208
Score = 192 bits (212), Expect = 2e-45
Identities = 210/279 (75%), Gaps = 0/279 (0%)
Strand=Plus/Plus
Query 378 ACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGC 437
|| || || || || || ||||| || || || | |||||| ||| |||| || ||| |
Sbjct 35266 ACGGCCGCCACGGTGTCGCGCGTGCGGGCGCTGTTCGACTTTACGGCCTCCGAGGCCGAC 35325
Query 438 GAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGG 497
||| || | ||| || |||||| | || || || |||||||| || ||| ||||||
Sbjct 35326 GAGCTGACGTTCAAAAAGGGCGACGTCATCGCCGTGCTCGAGTCGGTCTACCGCGACTGG 35385
Query 498 TGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTG 557
||| || || ||||| || ||||| ||||||||||| |||||||| ||||||| |||
Sbjct 35386 TGGCGCGGCTCGCTGCGCGGCCAGACGGGCATCTTCCCGCTCAACTACGTCGAGATCCTG 35445
Query 558 CAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCG 617
||| || || |||||||| ||| | || || ||||||||||| | || |||||
Sbjct 35446 GCGGACCCGACGCCCGAGGAGCTGGAGCGCGAGGCGCAGATGGAGGCACAGGTGTTTGCC 35505
Query 618 GAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656
|||||||||||||| ||||||||||| | || ||||||
Sbjct 35506 GAGATCAAGAACGTCGAGAAGCTGCTGACGCTCCTGAGC 35544
Score = 87.8 bits (96), Expect = 6e-14
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881
|||| || ||||| || || ||||| |||||||||||||| |||||||||||||| |||
Sbjct 35763 CAGACGACTTCACCCAACTGAACGAAAAGTTCATCAAGGCCCGCCGCGACTACGAGGCCC 35822
Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
| || || | || |||||||| || | |||||| ||||
Sbjct 35823 TGCTCGAGTCGTCAATGTCGCACCCGCCCCAGCCCAACTAC 35863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945442337880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |