Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq3 181 3e-42
>seq3
Length=407529
Score = 181 bits (200), Expect = 3e-42
Identities = 213/288 (74%), Gaps = 0/288 (0%)
Strand=Plus/Plus
Query 371 TGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGA 430
|||| | || ||||| || ||||| || || ||||| | || ||||| ||||| ||
Sbjct 266333 TGGATCTACGGCAGCGACTGTCTCTCGTGTCCGCGCTATCTATGACTTTGTTCCCTCAGA 266392
Query 431 ACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAA 490
| |||||| | | ||| || || ||||| ||||| ||| | |||||||| || ||
Sbjct 266393 AGATGGCGAGCTTGAATTCAAGAAGGGTGACATCATTGCAGTTTTGGAGTCTGTATATAA 266452
Query 491 GGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGA 550
||| ||||||| ||| ||| ||||||| || || || |||||||| | ||||| || ||
Sbjct 266453 GGATTGGTGGAGGGGATCTTTGCGTGGGCAAACTGGTATCTTCCCGTTGAACTACGTGGA 266512
Query 551 GAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGT 610
|||| | |||||| || |||||| || |||| || || ||||| |||||||||||
Sbjct 266513 GAAGATTACGGATCCGACGCCAGAGGAGGTCCAGAGGGAGGCGCAGATTGAGGCGGAAGT 266572
Query 611 CTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||||| |||||| ||| |||||||| || | || || |||||||
Sbjct 266573 GTTTGCTGAGATCCGGAATGTGGAGAAACTCTTGACTTTGTTGAGCAC 266620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945487683180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |