Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_021223.1
Length=1762
Score E
Sequences producing significant alignments: (Bits) Value
seq587 91.5 2e-15
>seq587
Length=22415
Score = 91.5 bits (100), Expect = 2e-15
Identities = 354/550 (64%), Gaps = 6/550 (1%)
Strand=Plus/Plus
Query 128 CTTCGACGACCTATTTGCCGGTGGTCAGCAGCAGGTCGACTTCTCCGCGCCTGAGGGCGG 187
|||| ||||||||||||| || | ||| |||| |||| | || ||||||| ||
Sbjct 1524 CTTCAACGACCTATTTGCGGGCGCCTCTCAGGAGGTGGACTGCAGTGCCCCTGAGGACGC 1583
Query 188 TATCGCTGC-TGTGCTGCCGGTCCCCGACGAGACCGACAATCTTCAGACGACGGCGCGCA 246
| |||| | | || || | ||| | ||||| || |||| || || | | |
Sbjct 1584 CG-CTCTGCCTATTCTTCCCATTCCCAATGAGACAGATGATCTGGCCACAACTACACATA 1642
Query 247 AGCTTGCCGCTCTGGCGGCCATTGTGGAACGCGGTAAGAGCCTGGCCGTCCACACCGGCT 306
|| ||| || || || || | || | ||| |||| || || || ||||||| |
Sbjct 1643 AGTTTGAGGCCCTTGCTGCGCTGGTCAAGTCCGGCAAGAATCTAGCAGTACACACCGCTT 1702
Query 307 ACGCCGGAGCGGCCCACGCCACCCGGGACCCCGTGGACCTGGCCAAGACATCCATGACGC 366
|||| | | || | || || ||||| || || || || ||| |||||||| |
Sbjct 1703 ACGCATGCACTCCCTATCAAACGCGAGACCCAGTTGAGCTAGCTAAGCTATCCATGAATC 1762
Query 367 CCGCCGAGGTGAAGCAATACGAGACATGGGCCCGTGGCATCCGCATGCCTGAGTTCAACT 426
|| || || ||||||||| ||| | ||| | ||||| ||||| | || | |
Sbjct 1763 CCCCCCAGCTGAAGCAATTTGAGGCCTGGCGCAAAGGCATAAAAATGCCGGCCTTTGATT 1822
Query 427 TCGTCACCAACCGAGAGCCCCTTCGCGGTCAGGAGGG--AGCCCGTAAACGATACGAGCG 484
| | | | |||||| ||| | || | | || | ||| || || ||||
Sbjct 1823 GGGCTAACTCCAAGGAGCCCGTTCAAGA-CACTAATGCTAGTCA-TAAGCGCTATGAGCA 1880
Query 485 ACGCGCCCGCGCCATGAATAAGATCTGGAAGACCAATGTTGCAGTGGCAGAGAACGCCAT 544
||||| ||||| |||||| ||| |||||||| | ||||| | |||||||||||
Sbjct 1881 GCGCGCTCGCGCTATGAATGCGATTTGGAAGACGACCCTTGCAACCCCCGAGAACGCCAT 1940
Query 545 GTTTGTGTCTATTCACCTGACCTACATGGTGCCCCTCGTCGCCGCAGTTTCAAAGATTGA 604
|| ||| || || || || || ||| |||||| | | || || | ||| | ||
Sbjct 1941 GTATGTCTCCATGCATATGGTATATGCGGTTCCCCTCTTGGTGGCCGTGGCGAAGGTGGA 2000
Query 605 GGCGGCGGAGATGGAACTGGTCGGCGGCTCCAACGACCTCACGGAGATGGAGCTGGCCGA 664
| || ||| || ||| || ||||| || | | || ||||||||||| || || ||
Sbjct 2001 GAGTGCCCAGAGGGCACTAGTAGGCGGTTCTACAGGACTAACGGAGATGGAACTTGCAGA 2060
Query 665 GGTGCAGACC 674
| | ||||||
Sbjct 2061 GCTCCAGACC 2070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5529543656832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |