Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_021223.1
Length=1762
Score E
Sequences producing significant alignments: (Bits) Value
seq311 86.0 7e-14
>seq311
Length=32934
Score = 86.0 bits (94), Expect = 7e-14
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 468 CGTAAACGATACGAGCGACGCGCCCGCGCCATGAATAAGATCTGGAAGACCAATGTTGCA 527
||||| || || |||| ||||| ||||| |||||| ||| |||||||| | |||||
Sbjct 12108 CGTAAGCGCTATGAGCAGCGCGCTCGCGCTATGAATGCGATTTGGAAGACGACCCTTGCA 12167
Query 528 GTGGCAGAGAACGCCATGTTTGTGTCTATTCACCTGACCTACATGGTGCCCCTCGTCGCC 587
| ||||||||||||| ||| || || || || || ||| |||||| | |
Sbjct 12168 ACCCCCGAGAACGCCATGTATGTCTCCATACATATGGTATATGCGGTTCCCCTCTTGGTG 12227
Query 588 GCAGTTTCAAAGATTGAGGCGGCGGAGATGGAACTGGTCGGCGGCTCCAACGACCTCACG 647
|| || | ||| | ||| || ||| || || || ||||| || | | || |||
Sbjct 12228 GCCGTGGCGAAGGTGGAGAGTGCCCAGAGGGCGCTAGTAGGCGGTTCTACAGGACTAACG 12287
Query 648 GAGATGGAGCTGGCCGAGGTGCAGACC 674
|||||||| || || ||| | ||||||
Sbjct 12288 GAGATGGAACTTGCAGAGCTCCAGACC 12314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5529542423040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |