Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_021223.1 Length=1762 Score E Sequences producing significant alignments: (Bits) Value seq311 86.0 7e-14 >seq311 Length=32934 Score = 86.0 bits (94), Expect = 7e-14 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 468 CGTAAACGATACGAGCGACGCGCCCGCGCCATGAATAAGATCTGGAAGACCAATGTTGCA 527 ||||| || || |||| ||||| ||||| |||||| ||| |||||||| | ||||| Sbjct 12108 CGTAAGCGCTATGAGCAGCGCGCTCGCGCTATGAATGCGATTTGGAAGACGACCCTTGCA 12167 Query 528 GTGGCAGAGAACGCCATGTTTGTGTCTATTCACCTGACCTACATGGTGCCCCTCGTCGCC 587 | ||||||||||||| ||| || || || || || ||| |||||| | | Sbjct 12168 ACCCCCGAGAACGCCATGTATGTCTCCATACATATGGTATATGCGGTTCCCCTCTTGGTG 12227 Query 588 GCAGTTTCAAAGATTGAGGCGGCGGAGATGGAACTGGTCGGCGGCTCCAACGACCTCACG 647 || || | ||| | ||| || ||| || || || ||||| || | | || ||| Sbjct 12228 GCCGTGGCGAAGGTGGAGAGTGCCCAGAGGGCGCTAGTAGGCGGTTCTACAGGACTAACG 12287 Query 648 GAGATGGAGCTGGCCGAGGTGCAGACC 674 |||||||| || || ||| | |||||| Sbjct 12288 GAGATGGAACTTGCAGAGCTCCAGACC 12314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5529542423040