Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq237 271 2e-69
>seq237
Length=377407
Score = 271 bits (300), Expect = 2e-69
Identities = 386/537 (72%), Gaps = 27/537 (5%)
Strand=Plus/Plus
Query 405 GCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATT 464
||||||||||||||||| || || || || |||||| | |||||||| || ||| ||
Sbjct 47694 GCCCTTTACGACTTCACCCCTTCTGAGCCTGGCGAGCTTGCTTTCCGGAAGAACGATATC 47753
Query 465 ATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACC 524
||||||||||| || |||||||| || ||||||||||| || ||||||||||||||
Sbjct 47754 ATTGCGGTTCTGGAATCTGTGTATAAAGACTGGTGGAAAGGCAGCCTGCGTGGACAGACG 47813
Query 525 GGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAG 584
|| |||||||| || ||||| || |||||| |||| || || || ||||||||||| |||
Sbjct 47814 GGTATCTTCCCGCTGAACTACGTGGAGAAGTTGCAAGACCCAACGAAGGAGGAGCTAGAG 47873
Query 585 AGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTA 644
||||| || |||||||| || ||||| || | |||||||||||||| |||||| ||||
Sbjct 47874 AGAGATGCACAGATGGAAGCTGAAGTATTCGGTGAGATCAAGAACGTAGAGAAGTTGCTG 47933
Query 645 GCTCTGCTGAGCACTAGTTC-GAGTGCCG----ACGCTAGG-------GACAATGAGGAG 692
|| ||||| ||| | || ||| | | | || ||| || | || |||
Sbjct 47934 GCCCTGCTCAGCGTAGGCTCTGAGGGAGGTGGCAGGCGAGGAGAAAGAGAGGAGGAAGAG 47993
Query 693 ATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGC 752
|||| |||||| || | ||| || || || || || ||||||||||||||||
Sbjct 47994 ATCAGCGAGCTGTATCAGAGAACACTGAGTATCCGACCCAAATTGATCGAGCTCATTGCG 48053
Query 753 AAGTATTCGCAAAAGAAGGGTAAGTGGA-ATCTTTTACGC--GAATTTGTGTGTT-GGC- 807
| || ||||| || || ||| || || | | | ||| | | ||| || ||
Sbjct 48054 AGATACTCGCAGAAAAAAGGTTGGTCGAGCCCCTGTTCGCCTGCTGTGGTGGATTCAGCT 48113
Query 808 -CAC-----TG----ATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCA 857
||| || | || || ||||||| || || |||||||| |||||||||||||
Sbjct 48114 TCACATCGGTGTACTAACGGGTGGCAGATGACTTTACACAGCTCAATGAGAAGTTCATCA 48173
Query 858 AGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGC 914
|||| | | |||||||| | | |||||| | || ||||| |||||| | ||||
Sbjct 48174 AGGCGAGGAGAGACTACGAGGCATTGCTTGAATCGTCCATGTCCCAACCACCACAGC 48230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945260782275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |