Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq237 271 2e-69 >seq237 Length=377407 Score = 271 bits (300), Expect = 2e-69 Identities = 386/537 (72%), Gaps = 27/537 (5%) Strand=Plus/Plus Query 405 GCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATT 464 ||||||||||||||||| || || || || |||||| | |||||||| || ||| || Sbjct 47694 GCCCTTTACGACTTCACCCCTTCTGAGCCTGGCGAGCTTGCTTTCCGGAAGAACGATATC 47753 Query 465 ATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACC 524 ||||||||||| || |||||||| || ||||||||||| || |||||||||||||| Sbjct 47754 ATTGCGGTTCTGGAATCTGTGTATAAAGACTGGTGGAAAGGCAGCCTGCGTGGACAGACG 47813 Query 525 GGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAG 584 || |||||||| || ||||| || |||||| |||| || || || ||||||||||| ||| Sbjct 47814 GGTATCTTCCCGCTGAACTACGTGGAGAAGTTGCAAGACCCAACGAAGGAGGAGCTAGAG 47873 Query 585 AGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTA 644 ||||| || |||||||| || ||||| || | |||||||||||||| |||||| |||| Sbjct 47874 AGAGATGCACAGATGGAAGCTGAAGTATTCGGTGAGATCAAGAACGTAGAGAAGTTGCTG 47933 Query 645 GCTCTGCTGAGCACTAGTTC-GAGTGCCG----ACGCTAGG-------GACAATGAGGAG 692 || ||||| ||| | || ||| | | | || ||| || | || ||| Sbjct 47934 GCCCTGCTCAGCGTAGGCTCTGAGGGAGGTGGCAGGCGAGGAGAAAGAGAGGAGGAAGAG 47993 Query 693 ATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGC 752 |||| |||||| || | ||| || || || || || |||||||||||||||| Sbjct 47994 ATCAGCGAGCTGTATCAGAGAACACTGAGTATCCGACCCAAATTGATCGAGCTCATTGCG 48053 Query 753 AAGTATTCGCAAAAGAAGGGTAAGTGGA-ATCTTTTACGC--GAATTTGTGTGTT-GGC- 807 | || ||||| || || ||| || || | | | ||| | | ||| || || Sbjct 48054 AGATACTCGCAGAAAAAAGGTTGGTCGAGCCCCTGTTCGCCTGCTGTGGTGGATTCAGCT 48113 Query 808 -CAC-----TG----ATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCA 857 ||| || | || || ||||||| || || |||||||| ||||||||||||| Sbjct 48114 TCACATCGGTGTACTAACGGGTGGCAGATGACTTTACACAGCTCAATGAGAAGTTCATCA 48173 Query 858 AGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGC 914 |||| | | |||||||| | | |||||| | || ||||| |||||| | |||| Sbjct 48174 AGGCGAGGAGAGACTACGAGGCATTGCTTGAATCGTCCATGTCCCAACCACCACAGC 48230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945260782275