Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq90 277 6e-71 >seq90 Length=159594 Score = 277 bits (306), Expect = 6e-71 Identities = 408/572 (71%), Gaps = 32/572 (6%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || || || || ||| || | || || ||||||||||| || || || Sbjct 53773 GGTACTACGGCTGCGACAGTGAGCCGAGTGAGGGCTCTCTACGACTTCACCCCTTCTGAG 53832 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| | |||||||| || ||| || ||||||||||| || ||||| || || Sbjct 53833 CCTGGCGAGCTTGCTTTCCGGAAGAACGATATCATTGCGGTTCTGGAATCTGTATATAAA 53892 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||||| || ||||||||||||||| || |||||||| || ||||| || ||| Sbjct 53893 GACTGGTGGAAAGGCAGTCTGCGTGGACAGACGGGTATCTTCCCGCTGAACTACGTGGAG 53952 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||| |||| || || || ||||||||||| ||||| || || |||||||| || ||||| Sbjct 53953 AAGTTGCAAGACCCGACGAAGGAGGAGCTAGAGAGGGATGCACAGATGGAAGCTGAAGTA 54012 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTT-CGA---- 666 || | |||||||||||||| || ||| ||||||| ||||| ||| ||| ||| Sbjct 54013 TTCGGTGAGATCAAGAACGTAGAAAAGTTGCTAGCCCTGCTCAGCGTAGGTTCCGAAGGA 54072 Query 667 -GTGCCGACGCTAGGGACAATGAG--------GAGATCACTTCGCTGTACCACAAGACAG 717 ||| | | || |||| || ||| ||||||| ||| || || | ||| Sbjct 54073 GGTGGC-AGGC-GGGGAGAAAGAGAGGAGGAAGAGATCAGCGAGCTATATCAGAGAACAC 54130 Query 718 TGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT 777 || || ||||| || |||||||| ||||||| | || ||||| || || ||| || Sbjct 54131 TGAGCATTCGGCCTAAATTGATCGAACTCATTGCGAGATACTCGCAGAAAAAAGGTTGGT 54190 Query 778 GGA--ATCTTTTACGCGAATTTGTG-----TGTTGGCCA-CTGAT-------CGTGTTCC 822 || | | || ||| | | ||| ||| | || | ||| || || | Sbjct 54191 CGAACACCGTTCACG-TACTGCGTGGCTATAGTTTGACATCGGATGTACTAACGGGTGGC 54249 Query 823 AGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCT 882 |||||| || ||||||||||||||||||||||||||||| | | |||||||| | || Sbjct 54250 AGATGACTTTACGCAGCTCAACGAGAAGTTCATCAAGGCGAGGAGAGACTACGAGGCACT 54309 Query 883 CCTTGAAGCCTCGATGTCGCAACCAGCGCAGC 914 |||||| | || ||||| ||||| | |||| Sbjct 54310 GCTTGAATCATCCATGTCCCAACCGCCACAGC 54341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945574885680