Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1016 181 3e-42
>seq1016
Length=10855
Score = 181 bits (200), Expect = 3e-42
Identities = 217/295 (74%), Gaps = 0/295 (0%)
Strand=Plus/Minus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426
|||| || || ||||| || ||||| || ||||| | |||||||||||||| | || |
Sbjct 1969 CATCCGGCACGACAGCTGCAACCGTATCTCGCGTCAGGGCCCTTTACGACTTTGCCCCGT 1910
Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
|||| || || || ||| ||| || ||||| | ||||| || |||||| || |
Sbjct 1909 CGGAGCCGGGTGAACTGGAGTTCAAGAAGGGCGATGTCATTGCCGTGCTCGAGAGCGTCT 1850
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
||||||| |||||| ||| || || || | || ||||||||||| |||||||| |
Sbjct 1849 ACAAGGATTGGTGGCGGGGGTCGCTCAAGGGGAAAACGGGCATCTTCCCACTCAACTACG 1790
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
|||||||||| ||| || ||| || ||||| | | || |||||||||||||| |
Sbjct 1789 TCGAGAAGCTCACGGACCCCACCCCTGACGAGCTTCAACGTGAGGCTCAGATGGAGGCCG 1730
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG 661
| ||||| || || || |||||||| ||||||||| | | ||||||| ||||
Sbjct 1729 AGGTCTTCGCTGAAATTAAGAACGTCGAGAAGCTGTTGACCTTGCTGAGTGCTAG 1675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944547291420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |