Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1016 181 3e-42 >seq1016 Length=10855 Score = 181 bits (200), Expect = 3e-42 Identities = 217/295 (74%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 |||| || || ||||| || ||||| || ||||| | |||||||||||||| | || | Sbjct 1969 CATCCGGCACGACAGCTGCAACCGTATCTCGCGTCAGGGCCCTTTACGACTTTGCCCCGT 1910 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 |||| || || || ||| ||| || ||||| | ||||| || |||||| || | Sbjct 1909 CGGAGCCGGGTGAACTGGAGTTCAAGAAGGGCGATGTCATTGCCGTGCTCGAGAGCGTCT 1850 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 ||||||| |||||| ||| || || || | || ||||||||||| |||||||| | Sbjct 1849 ACAAGGATTGGTGGCGGGGGTCGCTCAAGGGGAAAACGGGCATCTTCCCACTCAACTACG 1790 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 |||||||||| ||| || ||| || ||||| | | || |||||||||||||| | Sbjct 1789 TCGAGAAGCTCACGGACCCCACCCCTGACGAGCTTCAACGTGAGGCTCAGATGGAGGCCG 1730 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG 661 | ||||| || || || |||||||| ||||||||| | | ||||||| |||| Sbjct 1729 AGGTCTTCGCTGAAATTAAGAACGTCGAGAAGCTGTTGACCTTGCTGAGTGCTAG 1675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944547291420