Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 3e-30
>seq2
Length=3936381
Score = 141 bits (156), Expect = 3e-30
Identities = 200/281 (71%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 378 ACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGC 437
|| || ||||| || || || || ||||| |||| || |||| || ||||| ||
Sbjct 2987950 ACTGCGGCTACTGTTTCGCGTGTGCGCGCACTTTTTGATTTCATACCGTCGGAGGAGGGG 2988009
Query 438 GAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGG 497
||| ||| || |||||||||||| || || || || ||||| || | |||||||||
Sbjct 2988010 GAGCTGGAGTTTAACAAAGGCGACATCATCGCCGTACTGGAGTCGGTTTTTAAGGACTGG 2988069
Query 498 TGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTG 557
||| || || || ||||| |||| ||||||||||| ||||||||||| ||||||||
Sbjct 2988070 TGGCGAGGCTCGCTTCGTGGCAAGACGGGCATCTTCCCTCTCAACTATGTGGAGAAGCTT 2988129
Query 558 CAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCG 617
|| || || || || || || | || || |||||||||||| ||||| |
Sbjct 2988130 ACCGACCCCACACCCGAAGAACTGCAGCGTGAGGCCATGATGGAGGCGGAGGTCTTCTCC 2988189
Query 618 GAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||||| ||||| || ||||| | | ||||| |||||
Sbjct 2988190 GAGATTCGCAACGTCGAAAAGCTCTTGACGCTGCTCAGCAC 2988230
Score = 100 bits (110), Expect = 9e-18
Identities = 73/85 (86%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881
|||| ||||| || ||||||||||| |||||||||||||| |||||||||||||| || |
Sbjct 2988471 CAGACGATTTTACCCAGCTCAACGAAAAGTTCATCAAGGCTCGCCGCGACTACGAGACTC 2988530
Query 882 TCCTTGAAGCCTCGATGTCGCAACC 906
|||| |||||||| ||| | || ||
Sbjct 2988531 TCCTGGAAGCCTCCATGACCCATCC 2988555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945597907140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |