Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq4628 273 7e-70
>seq4628
Length=36477
Score = 273 bits (302), Expect = 7e-70
Identities = 402/558 (72%), Gaps = 17/558 (3%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || || || || || ||| |||||| || || || ||||||||| |||
Sbjct 12262 TCGGGGACGACCGCCGCGACGGTCAGCCGCGTCCGGGCGCTCTACGACTTCGTGCCGAGC 12203
Query 429 GAACCCGGCGAGTTGGCTTTC---CGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTG 485
|| ||||||||| ||| ||| ||| || || | || || || || ||| |||
Sbjct 12202 GAGCCCGGCGAGCTGGAGTTCAAGCGC---GGGGATGTGATCGCCGTGCTGGAGAGCGTG 12146
Query 486 TACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTAT 545
||||||||||||||| ||| || || |||| ||||||||||| ||||||||
Sbjct 12145 TACAAGGACTGGTGGCGGGGCAGCCTCAAGGGGAAGACGGGCATCTTCCCGCTCAACTAC 12086
Query 546 GTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCG 605
||||||||||| ||| || || |||||||| || | || || |||||||||||
Sbjct 12085 GTCGAGAAGCTCACGGACCCGACGCCCGAGGAGCTGCAGCGCGAGGCGCAGATGGAGGCC 12026
Query 606 GAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCG 665
|| || ||||| |||||||||||||| ||||||||| | | ||||||||||| | |
Sbjct 12025 GAGGTGTTTGCCGAGATCAAGAACGTCGAGAAGCTGTTGACGCTGCTGAGCACCA-ACAG 11967
Query 666 AGTGCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGA 723
| |||| ||| || |||||| ||||||||| | |||||||||| |||| || |||
Sbjct 11966 CGCGCCG-CGCGAGGAGGACAACGAGGAGATCTCCAAGCTGTACCACCAGACGCTGGCGA 11908
Query 724 TACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT--GGAA 781
| ||||| ||| ||||| |||| || | ||||| ||||| ||||| ||| || || |
Sbjct 11907 TCCGGCCCAAGCTGATCAAGCTGATCGAGAAGTACTCGCAGAAGAAAGGTGCGTCAGGGA 11848
Query 782 TCTTTTACGCGAATTTGTGTGTTG-GCCA--CTGATCGTGTTCCAGATGATTTCACGCAG 838
|| | || || || || ||| || | | | |||| || ||||| |||
Sbjct 11847 -GTTCGGCCCGGGGGTGAATGATGTTCCAGGCT-AACCCATCACAGACGACTTCACACAG 11790
Query 839 CTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATG 898
||||||||||||||||||||||| || | ||||||||| |||| || || |||| |||
Sbjct 11789 CTCAACGAGAAGTTCATCAAGGCGCGGAGAGACTACGAAGCCCTGCTCGAGTCCTCTATG 11730
Query 899 TCGCAACCAGCGCAGCCC 916
|| || ||| | ||||||
Sbjct 11729 TCACATCCACCACAGCCC 11712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944481191925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |