Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2118 273 7e-70
>seq2118
Length=54927
Score = 273 bits (302), Expect = 7e-70
Identities = 402/558 (72%), Gaps = 17/558 (3%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || || || || || ||| |||||| || || || ||||||||| |||
Sbjct 36776 TCGGGGACGACCGCCGCGACGGTCAGCCGCGTCCGGGCGCTCTACGACTTCGTGCCGAGC 36835
Query 429 GAACCCGGCGAGTTGGCTTTC---CGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTG 485
|| ||||||||| ||| ||| ||| || || | || || || || ||| |||
Sbjct 36836 GAGCCCGGCGAGCTGGAGTTCAAGCGC---GGGGATGTGATCGCCGTGCTGGAGAGCGTG 36892
Query 486 TACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTAT 545
||||||||||||||| ||| || || |||| ||||||||||| ||||||||
Sbjct 36893 TACAAGGACTGGTGGCGGGGCAGCCTCAAGGGGAAGACGGGCATCTTCCCGCTCAACTAC 36952
Query 546 GTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCG 605
||||||||||| ||| || || |||||||| || | || || |||||||||||
Sbjct 36953 GTCGAGAAGCTCACGGACCCGACGCCCGAGGAGCTGCAGCGCGAGGCGCAGATGGAGGCC 37012
Query 606 GAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCG 665
|| || ||||| |||||||||||||| ||||||||| | | ||||||||||| | |
Sbjct 37013 GAGGTGTTTGCCGAGATCAAGAACGTCGAGAAGCTGTTGACGCTGCTGAGCACCA-ACAG 37071
Query 666 AGTGCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGA 723
| |||| ||| || |||||| ||||||||| | |||||||||| |||| || |||
Sbjct 37072 CGCGCCG-CGCGAGGAGGACAACGAGGAGATCTCCAAGCTGTACCACCAGACGCTGGCGA 37130
Query 724 TACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT--GGAA 781
| ||||| ||| ||||| |||| || | ||||| ||||| ||||| ||| || || |
Sbjct 37131 TCCGGCCCAAGCTGATCAAGCTGATCGAGAAGTACTCGCAGAAGAAAGGTGCGTCAGGGA 37190
Query 782 TCTTTTACGCGAATTTGTGTGTTG-GCCA--CTGATCGTGTTCCAGATGATTTCACGCAG 838
|| | || || || || ||| || | | | |||| || ||||| |||
Sbjct 37191 -GTTCGGCCCGGGGGTGAATGATGTTCCAGGCT-AACCCATCACAGACGACTTCACACAG 37248
Query 839 CTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATG 898
||||||||||||||||||||||| || | ||||||||| |||| || || |||| |||
Sbjct 37249 CTCAACGAGAAGTTCATCAAGGCGCGGAGAGACTACGAAGCCCTGCTCGAGTCCTCTATG 37308
Query 899 TCGCAACCAGCGCAGCCC 916
|| || ||| | ||||||
Sbjct 37309 TCACATCCACCACAGCCC 37326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945151081530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |