Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2281 306 1e-79 >seq2281 Length=779450 Score = 306 bits (338), Expect = 1e-79 Identities = 650/953 (68%), Gaps = 52/953 (5%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | |||||||| |||| |||| | |||||||||||||| |||| || | | Sbjct 208663 TCAAGTCCAAGATCCTGGAGCACATGGAACAGTGGACGGAGATGTTTTCCAGCAATGCAG 208722 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAAC 126 || | ||||| ||||| ||||| || |||| ||| ||| | |||||| || | ||| | Sbjct 208723 ATTTCGGCATTATGGAACAGGCTTACATGAAGCTAAAGTCTCAAAGTACGCCTCATCTTC 208782 Query 127 TCTGGTTCGTTGGGAGCA--------CTGAC-CAACGTGTTGTA--GACCCTAACCTGCG 175 | | | | | || || || ||| | || | || || ||| | | Sbjct 208783 TACATTATATCGAAAACAACGTTATCCTCACACAA--TTCTGAACAGATCCGAACATTCA 208840 Query 176 ACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGA 235 ||| || |||||||| |||| ||||| || || || || ||||| |||||||| Sbjct 208841 ACCACCTTCGAAACCGACGAAGCGGCAGATAACCGAAATCGATCGACAGAAAGAAGAGGA 208900 Query 236 GGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGA-AAGCGGGACC-GAGCCATC--CG 291 |||||| |||||||| || || || || ||||||| || | ||| | | ||| || Sbjct 208901 GGAGCTCCAGATGGCCCTTGCCCTATCTATCAAGGAGAAACA--ACCAGCGGTATCTACG 208958 Query 292 CCGCCAGGTC--------CAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGCCCCGGA 343 | ||||||| |||| ||| | ||| || ||||| | || ||| | Sbjct 208959 CAGCCAGGTAGCTCTTCACAACAAGCGGTGGGCA---GCTCCACAGC--TCAATCCC--A 209011 Query 344 ACAAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCG 403 | ||||| |||| |||| | ||||| || || ||||| || || || || || || Sbjct 209012 AGCAGAGCCTTCACAAGGTATTCCGTCTGGGACGACTGCAGCCACAGTATCTCGTGTCCG 209071 Query 404 CGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACAT 463 |||| | ||||| || ||| || || ||||| ||| | ||||| |||||||| || Sbjct 209072 CGCCTTATACGATTTTCAGCCTTCAGAGCCCGGAGAGCTTCAGTTCCGAAAAGGCGATAT 209131 Query 464 TATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGAC 523 || || || | || || || || ||||||||||||||||||||||| | || ||| Sbjct 209132 CATAGCTGTATTGGAATCCGTTTATAAGGACTGGTGGAAGGGTTCTCTAAGGGGCCAGGT 209191 Query 524 CGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGA 583 ||||| || || | |||||||| |||||||| ||||| || |||||||| | | Sbjct 209192 TGGCATATTTCCATTGAACTATGTGGAGAAGCTTTCAGATCCCACTCAGGAGGAGTTACA 209251 Query 584 GAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCT 643 | ||||||| |||||||| || ||||| || || ||||| || || || ||||| ||| | Sbjct 209252 GCGAGAAGCCCAGATGGAAGCTGAAGTTTTCGCTGAGATAAAAAATGTTGAGAAACTGTT 209311 Query 644 AGCTCTGCTGAGCACTAGT--TCGAGTGCCGA---CGCTAGGGACAATGAGGAGATCACT 698 || ||||||||||| ||| | | || || || | || || || ||||| || Sbjct 209312 GGCGCTGCTGAGCACCAGTAGCCCTGAGCTGAATGTGCAA--GAGAACGAAGAGATTACA 209369 Query 699 TCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTAT 758 || || ||| ||| | |||| ||||| ||| |||| ||| | |||||||| ||| Sbjct 209370 AAACTATATCACTCGACGCTTGCGATTCGGCCAAAGCTGATAGAGTTGATTGGCAAATAT 209429 Query 759 TCGCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGT--GTTGGC-CACTGATC 815 || | ||||| ||||||| ||| || || | || | | || ||||| Sbjct 209430 TCCAAGAAGAAAGGTAAGT---ATC---CACAAGAGGTGGTTTTGGAACGCTTGCTGAT- 209482 Query 816 GTGTTC-CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTAC 874 | |||| ||||||| || || |||||||||||||| || ||||| || || | || || Sbjct 209483 GCGTTCACAGATGACTTTACTCAGCTCAACGAGAAATTTATCAAAGCGCGAAGAGATTAT 209542 Query 875 GAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCG 927 ||| | | | ||||| || ||| | || |||||||||||| ||||| || Sbjct 209543 GAAGCATTATTAGAAGCATCCATGACTCACCCAGCGCAGCCCCATTACGGCCG 209595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945124920780