Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq7 260 4e-66 >seq7 Length=2048283 Score = 260 bits (288), Expect = 4e-66 Identities = 375/525 (71%), Gaps = 19/525 (4%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || || |||||||| || || || || || | ||||||| ||||| Sbjct 287741 TCAGGTACAACTGCCGCAACCGTCTCACGAGTACGAGCGCTCTTCGACTTCCAACCCTCT 287682 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 ||||| ||||| || || ||||| ||||| | || || || ||||| ||||| || Sbjct 287681 GAACCGGGCGAATTACAGTTTCGCAAGGGCGATGTGATAGCTGTGCTCGAATCTGTTTAT 287622 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 || || |||||||| || ||| | || || || |||||||| |||||||||||||||||| Sbjct 287621 AAAGATTGGTGGAAAGGCTCTTTACGCGGCCAAACCGGCATATTCCCCCTCAACTATGTC 287562 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 |||||||| || ||||| || ||||| || ||| |||||| || |||||||| || Sbjct 287561 GAGAAGCTACAAGATCCCACTCCCGAGGAACTGCAGAAAGAAGCACAAATGGAGGCAGAG 287502 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAG- 667 || |||| | |||| || || || ||||| ||||| || || ||||||| || || | Sbjct 287501 GTATTTGGGCAGATGAAAAATGTCGAGAAACTGCTCGCCCTTTTGAGCACGAGCACGGGG 287442 Query 668 --TGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATA 725 | ||| | ||||| |||||||| || | ||||||||| ||| || | ||| Sbjct 287441 GATATGAACGTGCGCGACAACGAGGAGATTACGGAGTTGTACCACAGTACATTGGCAATA 287382 Query 726 CGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGA-ATCT 784 ||||||||| | || ||| | ||||| || ||| | || ||||| ||||| | | ||| Sbjct 287381 CGGCCGAAGCTAATTGAGTTGATTGGGAAATATACACAGAAGAAAGGTAAATTCAGATC- 287323 Query 785 TTTACGCGAATTTGT----GTG------TTGGCCACTGATCG--TGTTCCAGATGATTTC 832 | | | | ||| ||| | || | | | | | || |||||||||| Sbjct 287322 --GAGGAGGGTCTGTCATCGTGCAATGAATTGCTAATTTTTGGCTCGTCTAGATGATTTC 287265 Query 833 ACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877 ||| ||||||||||| |||||||| ||||| ||||| |||||| Sbjct 287264 CAGCAACTCAACGAGAAATTCATCAAAGCACGACGCGATTACGAA 287220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945585349980