Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq9 320 5e-84 >seq9 Length=4529175 Score = 320 bits (354), Expect = 5e-84 Identities = 403/551 (73%), Gaps = 17/551 (3%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || |||||||| || ||||| ||||| || || || || | ||||||| ||| ||| Sbjct 3258083 TCCGGCACCACAGCTGCGACCGTGTCCCGAGTACGAGCGCTGTTCGACTTCCAGCCGTCG 3258024 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || || |||||| | || |||||||||||| | || || || || || || |||||| Sbjct 3258023 GAGCCGGGCGAGCTCCAATTTCGCAAAGGCGACGTCATCGCCGTGCTAGAATCCGTGTAC 3257964 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 || |||||||||||||| || |||||||| ||||| || ||||| || || ||||| ||| Sbjct 3257963 AAAGACTGGTGGAAGGGCTCGCTGCGTGGGCAGACGGGTATCTTTCCTCTGAACTACGTC 3257904 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 || || || || ||||| || || ||| | ||||||| || ||||||||||| ||| Sbjct 3257903 GAAAAACTCCAAGATCCCACACCCGAAGAGTTGCAGAGAGAGGCGCAGATGGAGGCCGAA 3257844 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 || || | ||||||||||||||||||| |||| || ||||||||||| ||| || | Sbjct 3257843 GTGTTCGGACAGATCAAGAACGTGGAGAAATTGCTCGCGCTGCTGAGCACGAGTACGGGG 3257784 Query 669 GCC---GACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATA 725 | | ||| | || || |||||||| || ||| || || | || || | || Sbjct 3257783 GACATGAACGTGCGCGATAACGAGGAGATTACCGAGCTATATCAGAGCACGTTGGCCATC 3257724 Query 726 CGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTT 785 |||| |||||||| || | || |||||||| |||| ||||| ||| || | ||| Sbjct 3257723 AGGCCAAAGTTGATTGACTTGATAGGCAAGTACACGCAGAAGAAAGGTGAG-GCCGGCTT 3257665 Query 786 TTACGCGAATTTGTGTGTTG----------GCCACTGATCGTG--TTCCAGATGATTTCA 833 | | | || |||| || | ||||| |||| | ||||| || ||| Sbjct 3257664 GTGCAC-CATGAGTGTTATGCAGCACGCGAGTGACTGACCGTGACTGCCAGACGACTTCC 3257606 Query 834 CGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCT 893 ||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||| | | Sbjct 3257605 AGCAACTCAACGAGAAGTTCATCAAGGCCCGCCGCGACTACGAAGCCCTCCTCGAAACGT 3257546 Query 894 CGATGTCGCAA 904 | ||| ||||| Sbjct 3257545 CCATGGCGCAA 3257535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945595988685