Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq6 304 4e-79
>seq6
Length=4175021
Score = 304 bits (336), Expect = 4e-79
Identities = 399/549 (73%), Gaps = 19/549 (3%)
Strand=Plus/Minus
Query 352 AGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTT 411
||||||| || | | || || || || || || ||||| || || || || ||||| |
Sbjct 1679502 AGCATCAGGCGGTGCCCTCAGGTACGACCGCTGCCACCGTTTCGCGGGTACGGGCCCTCT 1679443
Query 412 ACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGG 471
|||||| || |||||||||||||||||| ||||||||||||||| | ||||| |
Sbjct 1679442 TCGACTTTCAACCTTCGGAACCCGGCGAGTTGCAATTCCGCAAAGGCGACGTAATTGCCG 1679383
Query 472 TTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCT 531
|||| || || || ||||| |||||||||||||| ||| | || || || || || ||||
Sbjct 1679382 TTCTTGAATCCGTATACAAAGACTGGTGGAAGGGCTCTTTACGCGGCCAAACGGGAATCT 1679323
Query 532 TCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAG 591
||||||||||||| ||||||||||| || || || || ||||| | ||| |||||
Sbjct 1679322 TCCCCCTCAACTACGTCGAGAAGCTACAAGACCCCACTCCCGAGGAATTGCAGAAAGAAG 1679263
Query 592 CTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGC 651
| || |||||||| || || |||| | |||||||||| || ||||| ||||| || || |
Sbjct 1679262 CACAAATGGAGGCAGAGGTGTTTGGGCAGATCAAGAATGTCGAGAAACTGCTCGCCCTTC 1679203
Query 652 TGAGCACTAGTTCGAGTGCC---GACGCTAGGGACAATGAGGAGATCACTTCGCTGTACC 708
| ||||| || || | | | ||| | ||||| |||||||| || | ||||||
Sbjct 1679202 TAAGCACGAGCACGGGGGACATGAACGTGCGAGACAACGAGGAGATTACCGAGTTGTACC 1679143
Query 709 ACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGA 768
||| || || |||| ||||| ||||| || ||||| ||||| || ||| |||||||||
Sbjct 1679142 ACAGCACGTTGGCGATTCGGCCCAAGTTAATTGAGCTGATTGGGAAATATACGCAAAAGA 1679083
Query 769 AGGGTA-----AGTGG--------AATCTTTTAC-GCGAATTTGTGTGTTGGCCACTGAT 814
| |||| || || | || | || | | | || | | || ||
Sbjct 1679082 AAGGTAAATCCAGAGGAGAGAGAAAGACTGTCACGGTGCAACACAATGCTAACATCT-AT 1679024
Query 815 C-GTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTA 873
| || | |||| |||||| ||| ||||||||||| |||||||||||||||||||| ||
Sbjct 1679023 CGGTCGTTCAGACGATTTCCAGCAACTCAACGAGAAATTCATCAAGGCACGCCGCGATTA 1678964
Query 874 CGAAACCCT 882
||| ||||
Sbjct 1678963 TGAAGCCCT 1678955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945551689815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |