Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq657 322 2e-84
>seq657
Length=446211
Score = 322 bits (356), Expect = 2e-84
Identities = 651/948 (69%), Gaps = 66/948 (7%)
Strand=Plus/Plus
Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66
|||| ||||||| |||| ||||||| || ||||| |||||||| | || || || |
Sbjct 397188 TCAAATCAAAGATAGTCGAACGTATGGAGGAGTGGACAGAGATGTTTTCTAGCAATCCCG 397247
Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGAT---C 123
|| | || || ||||||||||| ||||||| ||| |||||| |||| ||| || |
Sbjct 397248 ATTTCGGTATTATGGAGCAGGCATATATGAAGCTGAAGACAACCAGTG--TGTAATTTGC 397305
Query 124 AAC-----TCTGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACC 178
|| |||| ||| || | || || |||| |||||| | |||||| ||
Sbjct 397306 AAAGATATTCTG-TTCATT-----CTCTTACTGACGTTGCACAGACCCAAGCCTGCGGCC 397359
Query 179 TCCGTCGAAACCTCAGAAGAC-CCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGG 237
||| ||||| ||| | || || ||| ||||| ||| ||||| |||||||||||||| |
Sbjct 397360 TCCTTCGAAGCCT-ACAAAACGCCAAATCACAGACATTGACCGTCAGAAGGAAGAGGAAG 397418
Query 238 AGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCCGCCG--C 295
|| | |||||||| || || || || || ||||| | || || |||||| |
Sbjct 397419 AGTTGCAGATGGCCCTTGCCCTGTCGGTAAAGGACA---------AGACAGCCGCCGGTC 397469
Query 296 CAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATC--CGCCC------CGGAACA- 346
|| |||| || |||| || || ||| || ||||| | || ||
Sbjct 397470 CA--TCCACACAATCGCAGGCCGCTGCTCCATCCAGTTCATCGCCCGCTGCACAGACCAC 397527
Query 347 --AG--AGCAGCATCA-AGCTA-TTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGT 400
|| ||| || | ||| | || | || ||||| || || || ||||| || || ||
Sbjct 397528 TCAGTCAGCCGCTCCTCAGCCAGTTCCGTCAGGAACAACTGCTGCAACCGTTTCACGTGT 397587
Query 401 TCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGA 460
| || || ||||||||| ||| || || ||||| || || ||||| || || ||
Sbjct 397588 CAGGGCGCTATACGACTTCCAGCCATCAGAGCCCGGAGAACTGCAGTTCCGTAAGGGTGA 397647
Query 461 CATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACA 520
|| ||||| || | || || ||||| ||||| |||||||||||||| | | |||||
Sbjct 397648 TATCATTGCTGTCATAGAATCCGTGTATAAGGATTGGTGGAAGGGTTCAATCAGAGGACA 397707
Query 521 GACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCT 580
||| ||||| ||||| | |||||||| || ||||| | ||||| || || |||| |
Sbjct 397708 GACAGGCATTTTCCCGTTGAACTATGTGGAAAAGCTTCCCGATCCAACAGAGCAGGATTT 397767
Query 581 CGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCT 640
|| | |||||||||||||| || ||||||||| | |||||||||| || || |||||
Sbjct 397768 GCAGCGCGAAGCTCAGATGGAAGCAGAAGTCTTTTCACAGATCAAGAATGTCGAAAAGCT 397827
Query 641 GCTAGCTCTGCTGAGCACTA---GTTCGAGTGC-CGACGCTAGGGACAATGAGGAGATCA 696
| | | || ||||| |||| ||||| | || | ||| ||||| || || || |
Sbjct 397828 GTTGACACTTCTGAGTACTAGCGGTTCG-GAGCTCAACGTCCAAGACAACGAAGAAATAA 397886
Query 697 CTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGT 756
|||| | || ||| || || | || ||||| |||||||||||| | || || || |
Sbjct 397887 CTTCATTATATCACTCAACGCTGGCAATCCGGCCAAAGTTGATCGAGTTGATCGGAAAAT 397946
Query 757 ATTCGCAAAAGAAGGGTAAG---TGGAATCTTTTACGCGAATTTGTGTGTTGGCC----- 808
||||||||||||| ||| | || | ||||| | |||| ||| | ||
Sbjct 397947 ATTCGCAAAAGAAAGGTCCGTTATGCTGTTATTTACCC---TTTG-GTGGTTTCCTTCCA 398002
Query 809 -ACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCG 867
||| | || | |||||| || || ||| | ||||||| ||||||||||| || |
Sbjct 398003 TACTCACAGTCGT--AGATGAGTTTACCCAGTTGAACGAGAGATTCATCAAGGCGCGAAG 398060
Query 868 CGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915
||||||||| | || | || || || ||||| || || ||||||||
Sbjct 398061 AGACTACGAAGCTCTGTTGGAGGCGTCAATGTCCCACCCGGCGCAGCC 398108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945452976585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |