Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq657 322 2e-84 >seq657 Length=446211 Score = 322 bits (356), Expect = 2e-84 Identities = 651/948 (69%), Gaps = 66/948 (7%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 |||| ||||||| |||| ||||||| || ||||| |||||||| | || || || | Sbjct 397188 TCAAATCAAAGATAGTCGAACGTATGGAGGAGTGGACAGAGATGTTTTCTAGCAATCCCG 397247 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGAT---C 123 || | || || ||||||||||| ||||||| ||| |||||| |||| ||| || | Sbjct 397248 ATTTCGGTATTATGGAGCAGGCATATATGAAGCTGAAGACAACCAGTG--TGTAATTTGC 397305 Query 124 AAC-----TCTGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACC 178 || |||| ||| || | || || |||| |||||| | |||||| || Sbjct 397306 AAAGATATTCTG-TTCATT-----CTCTTACTGACGTTGCACAGACCCAAGCCTGCGGCC 397359 Query 179 TCCGTCGAAACCTCAGAAGAC-CCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGG 237 ||| ||||| ||| | || || ||| ||||| ||| ||||| |||||||||||||| | Sbjct 397360 TCCTTCGAAGCCT-ACAAAACGCCAAATCACAGACATTGACCGTCAGAAGGAAGAGGAAG 397418 Query 238 AGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCCGCCG--C 295 || | |||||||| || || || || || ||||| | || || |||||| | Sbjct 397419 AGTTGCAGATGGCCCTTGCCCTGTCGGTAAAGGACA---------AGACAGCCGCCGGTC 397469 Query 296 CAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATC--CGCCC------CGGAACA- 346 || |||| || |||| || || ||| || ||||| | || || Sbjct 397470 CA--TCCACACAATCGCAGGCCGCTGCTCCATCCAGTTCATCGCCCGCTGCACAGACCAC 397527 Query 347 --AG--AGCAGCATCA-AGCTA-TTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGT 400 || ||| || | ||| | || | || ||||| || || || ||||| || || || Sbjct 397528 TCAGTCAGCCGCTCCTCAGCCAGTTCCGTCAGGAACAACTGCTGCAACCGTTTCACGTGT 397587 Query 401 TCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGA 460 | || || ||||||||| ||| || || ||||| || || ||||| || || || Sbjct 397588 CAGGGCGCTATACGACTTCCAGCCATCAGAGCCCGGAGAACTGCAGTTCCGTAAGGGTGA 397647 Query 461 CATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACA 520 || ||||| || | || || ||||| ||||| |||||||||||||| | | ||||| Sbjct 397648 TATCATTGCTGTCATAGAATCCGTGTATAAGGATTGGTGGAAGGGTTCAATCAGAGGACA 397707 Query 521 GACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCT 580 ||| ||||| ||||| | |||||||| || ||||| | ||||| || || |||| | Sbjct 397708 GACAGGCATTTTCCCGTTGAACTATGTGGAAAAGCTTCCCGATCCAACAGAGCAGGATTT 397767 Query 581 CGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCT 640 || | |||||||||||||| || ||||||||| | |||||||||| || || ||||| Sbjct 397768 GCAGCGCGAAGCTCAGATGGAAGCAGAAGTCTTTTCACAGATCAAGAATGTCGAAAAGCT 397827 Query 641 GCTAGCTCTGCTGAGCACTA---GTTCGAGTGC-CGACGCTAGGGACAATGAGGAGATCA 696 | | | || ||||| |||| ||||| | || | ||| ||||| || || || | Sbjct 397828 GTTGACACTTCTGAGTACTAGCGGTTCG-GAGCTCAACGTCCAAGACAACGAAGAAATAA 397886 Query 697 CTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGT 756 |||| | || ||| || || | || ||||| |||||||||||| | || || || | Sbjct 397887 CTTCATTATATCACTCAACGCTGGCAATCCGGCCAAAGTTGATCGAGTTGATCGGAAAAT 397946 Query 757 ATTCGCAAAAGAAGGGTAAG---TGGAATCTTTTACGCGAATTTGTGTGTTGGCC----- 808 ||||||||||||| ||| | || | ||||| | |||| ||| | || Sbjct 397947 ATTCGCAAAAGAAAGGTCCGTTATGCTGTTATTTACCC---TTTG-GTGGTTTCCTTCCA 398002 Query 809 -ACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCG 867 ||| | || | |||||| || || ||| | ||||||| ||||||||||| || | Sbjct 398003 TACTCACAGTCGT--AGATGAGTTTACCCAGTTGAACGAGAGATTCATCAAGGCGCGAAG 398060 Query 868 CGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 ||||||||| | || | || || || ||||| || || |||||||| Sbjct 398061 AGACTACGAAGCTCTGTTGGAGGCGTCAATGTCCCACCCGGCGCAGCC 398108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945452976585