Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq750 226 9e-56
seq264 221 4e-54
>seq750
Length=148929
Score = 226 bits (250), Expect = 9e-56
Identities = 394/561 (70%), Gaps = 33/561 (6%)
Strand=Plus/Plus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
|||| || || || || || || |||||| | || ||||||||||| || || ||||
Sbjct 85750 CTGGGACAACTGCTGCGACTGTGAGCCGCGTCAGGGCACTTTACGACTTTACACCATCGG 85809
Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489
| || || ||| |||| ||| || ||| || |||||||| || ||| ||| ||||
Sbjct 85810 AGCCTGGAGAGCTGGCGTTCAAGAAGAACGATATCATTGCGGTGCTGGAGAGTGTCTACA 85869
Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549
| || |||||||||||| ||||| |||||||| ||||| ||||| | ||||| || |
Sbjct 85870 AAGATTGGTGGAAGGGTAGCCTGCGAGGACAGACTGGCATTTTCCCGTTAAACTACGTGG 85929
Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609
|||||||||||||| | |||||||| ||||| || | || ||||| |||||| ||||||
Sbjct 85930 AGAAGCTGCAGGATGCGACCAAGGAAGAGCTAGAACGCGACGCTCAAATGGAGTCGGAAG 85989
Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT--AGTTCG-A 666
| |||| ||| | | || |||||| |||| || || || || | || | | |
Sbjct 85990 TATTTGGTGAGGTGCGCAGTGTTGAGAAGTTGCTTGCACTTCTCAGTGTTGAAGGTGGAA 86049
Query 667 GTGCCGACGCTAGGGACAA---TGAGG-AGATCACTTCGC-----TGTACCACAAGACAG 717
||| | | | |||| | | ||||| |||| | |||| ||||||| ||
Sbjct 86050 GTGGC-AGG--AGGGGCGAGCGTGAGGAAGATGAGATCGCAGAGTTGTACCAGCGTACTT 86106
Query 718 TGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT 777
|| || || ||||||||| | ||| | ||||| ||||||||||| |||||||||| ||
Sbjct 86107 TGAGCATCCGACCGAAGTTGGTGGAGTTGATTGGGAAGTATTCGCAGAAGAAGGGTATGT 86166
Query 778 GGA--------ATCTT--TTACGC-GAATTTGTGTGTTGGCCACTGATCGTG-TTCCAGA 825
| |||| | || |||| | ||| |||| | | || | ||||
Sbjct 86167 TTATGCCGATGGTCTTGACAAGGCTGAATCAG---GTT--TCACT-AACATGCATGCAGA 86220
Query 826 TGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCT 885
|| ||||| ||||| |||||||| ||||||||||| | | ||||| || | |||||
Sbjct 86221 CGACTTCACCCAGCTGAACGAGAAATTCATCAAGGCCAGGAGAGACTATGAGGCGCTCCT 86280
Query 886 TGAAGCCTCGATGTCGCAACC 906
|||| |||| ||||| || ||
Sbjct 86281 TGAATCCTCCATGTCACAGCC 86301
>seq264
Length=44304
Score = 221 bits (244), Expect = 4e-54
Identities = 388/557 (70%), Gaps = 25/557 (4%)
Strand=Plus/Plus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
|||| || || || || || || |||||| | || || |||||||| || || ||||
Sbjct 5426 CTGGGACAACTGCTGCGACTGTGAGCCGCGTCAGGGCACTCTACGACTTTACACCATCGG 5485
Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489
| || || ||| |||| ||| || ||||| |||||||| | ||| || ||||
Sbjct 5486 AGCCTGGAGAGCTGGCGTTCAAGAAGAATGACATAATTGCGGTGTTGGAGAGCGTCTACA 5545
Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549
| || ||||||||||| |||||| |||||||||||||| ||||| | || || || |
Sbjct 5546 AAGATTGGTGGAAGGGAAGTCTGCGAGGACAGACCGGCATTTTCCCGTTGAATTACGTGG 5605
Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609
|||||||||||||| | |||||||| ||||| ||| | || |||||||||||| ||||||
Sbjct 5606 AGAAGCTGCAGGATGCGACCAAGGAAGAGCTAGAGCGCGACGCTCAGATGGAGTCGGAAG 5665
Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT--AGTTCG-A 666
| |||| ||| | | || ||||||||||| || || || || | || | | |
Sbjct 5666 TATTTGGTGAGGTGCGCAGTGTCGAGAAGCTGCTTGCACTTCTCAGTGTTGAAGGTGGAA 5725
Query 667 GT-GCCGAC---GCTA--GGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGT 720
|| || ||| || | | || | || |||||| | | ||||||| || ||
Sbjct 5726 GTGGCAGACGGGGCGAGCGTGAGGAAGATGAGATCGCAGAGTTGTACCAGCGTACTCTGA 5785
Query 721 CGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGA 780
|| || ||||||||| | ||| | ||||| ||||| ||||| |||||||||| || |
Sbjct 5786 GCATCCGACCGAAGTTGGTGGAGTTGATTGGGAAGTACTCGCAGAAGAAGGGTATGTTTA 5845
Query 781 --------ATCTT--TTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTC-CAGATGAT 829
||||| | || | | || | ||| | | || | |||| ||
Sbjct 5846 CGCCGATGATCTTGACAAGGCTCAATCAGGTTAT----ACT-AACATGCACGCAGACGAC 5900
Query 830 TTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAA 889
||||| ||||| |||||||||||||| ||||| | | ||||| || | |||||||||
Sbjct 5901 TTCACCCAGCTGAACGAGAAGTTCATAAAGGCCAGGAGAGACTATGAGGCGCTCCTTGAA 5960
Query 890 GCCTCGATGTCGCAACC 906
|||| ||||| || ||
Sbjct 5961 TCCTCCATGTCACAGCC 5977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945432745605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |