Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq750 226 9e-56 seq264 221 4e-54 >seq750 Length=148929 Score = 226 bits (250), Expect = 9e-56 Identities = 394/561 (70%), Gaps = 33/561 (6%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || || || || |||||| | || ||||||||||| || || |||| Sbjct 85750 CTGGGACAACTGCTGCGACTGTGAGCCGCGTCAGGGCACTTTACGACTTTACACCATCGG 85809 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | || || ||| |||| ||| || ||| || |||||||| || ||| ||| |||| Sbjct 85810 AGCCTGGAGAGCTGGCGTTCAAGAAGAACGATATCATTGCGGTGCTGGAGAGTGTCTACA 85869 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 | || |||||||||||| ||||| |||||||| ||||| ||||| | ||||| || | Sbjct 85870 AAGATTGGTGGAAGGGTAGCCTGCGAGGACAGACTGGCATTTTCCCGTTAAACTACGTGG 85929 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 |||||||||||||| | |||||||| ||||| || | || ||||| |||||| |||||| Sbjct 85930 AGAAGCTGCAGGATGCGACCAAGGAAGAGCTAGAACGCGACGCTCAAATGGAGTCGGAAG 85989 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT--AGTTCG-A 666 | |||| ||| | | || |||||| |||| || || || || | || | | | Sbjct 85990 TATTTGGTGAGGTGCGCAGTGTTGAGAAGTTGCTTGCACTTCTCAGTGTTGAAGGTGGAA 86049 Query 667 GTGCCGACGCTAGGGACAA---TGAGG-AGATCACTTCGC-----TGTACCACAAGACAG 717 ||| | | | |||| | | ||||| |||| | |||| ||||||| || Sbjct 86050 GTGGC-AGG--AGGGGCGAGCGTGAGGAAGATGAGATCGCAGAGTTGTACCAGCGTACTT 86106 Query 718 TGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT 777 || || || ||||||||| | ||| | ||||| ||||||||||| |||||||||| || Sbjct 86107 TGAGCATCCGACCGAAGTTGGTGGAGTTGATTGGGAAGTATTCGCAGAAGAAGGGTATGT 86166 Query 778 GGA--------ATCTT--TTACGC-GAATTTGTGTGTTGGCCACTGATCGTG-TTCCAGA 825 | |||| | || |||| | ||| |||| | | || | |||| Sbjct 86167 TTATGCCGATGGTCTTGACAAGGCTGAATCAG---GTT--TCACT-AACATGCATGCAGA 86220 Query 826 TGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCT 885 || ||||| ||||| |||||||| ||||||||||| | | ||||| || | ||||| Sbjct 86221 CGACTTCACCCAGCTGAACGAGAAATTCATCAAGGCCAGGAGAGACTATGAGGCGCTCCT 86280 Query 886 TGAAGCCTCGATGTCGCAACC 906 |||| |||| ||||| || || Sbjct 86281 TGAATCCTCCATGTCACAGCC 86301 >seq264 Length=44304 Score = 221 bits (244), Expect = 4e-54 Identities = 388/557 (70%), Gaps = 25/557 (4%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || || || || |||||| | || || |||||||| || || |||| Sbjct 5426 CTGGGACAACTGCTGCGACTGTGAGCCGCGTCAGGGCACTCTACGACTTTACACCATCGG 5485 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | || || ||| |||| ||| || ||||| |||||||| | ||| || |||| Sbjct 5486 AGCCTGGAGAGCTGGCGTTCAAGAAGAATGACATAATTGCGGTGTTGGAGAGCGTCTACA 5545 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 | || ||||||||||| |||||| |||||||||||||| ||||| | || || || | Sbjct 5546 AAGATTGGTGGAAGGGAAGTCTGCGAGGACAGACCGGCATTTTCCCGTTGAATTACGTGG 5605 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 |||||||||||||| | |||||||| ||||| ||| | || |||||||||||| |||||| Sbjct 5606 AGAAGCTGCAGGATGCGACCAAGGAAGAGCTAGAGCGCGACGCTCAGATGGAGTCGGAAG 5665 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT--AGTTCG-A 666 | |||| ||| | | || ||||||||||| || || || || | || | | | Sbjct 5666 TATTTGGTGAGGTGCGCAGTGTCGAGAAGCTGCTTGCACTTCTCAGTGTTGAAGGTGGAA 5725 Query 667 GT-GCCGAC---GCTA--GGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGT 720 || || ||| || | | || | || |||||| | | ||||||| || || Sbjct 5726 GTGGCAGACGGGGCGAGCGTGAGGAAGATGAGATCGCAGAGTTGTACCAGCGTACTCTGA 5785 Query 721 CGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGA 780 || || ||||||||| | ||| | ||||| ||||| ||||| |||||||||| || | Sbjct 5786 GCATCCGACCGAAGTTGGTGGAGTTGATTGGGAAGTACTCGCAGAAGAAGGGTATGTTTA 5845 Query 781 --------ATCTT--TTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTC-CAGATGAT 829 ||||| | || | | || | ||| | | || | |||| || Sbjct 5846 CGCCGATGATCTTGACAAGGCTCAATCAGGTTAT----ACT-AACATGCACGCAGACGAC 5900 Query 830 TTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAA 889 ||||| ||||| |||||||||||||| ||||| | | ||||| || | ||||||||| Sbjct 5901 TTCACCCAGCTGAACGAGAAGTTCATAAAGGCCAGGAGAGACTATGAGGCGCTCCTTGAA 5960 Query 890 GCCTCGATGTCGCAACC 906 |||| ||||| || || Sbjct 5961 TCCTCCATGTCACAGCC 5977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945432745605