Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq63 383 5e-103
>seq63
Length=103183
Score = 383 bits (424), Expect = 5e-103
Identities = 665/957 (69%), Gaps = 50/957 (5%)
Strand=Plus/Minus
Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61
|||| | ||||| |||||| | ||||| |||| || |||| |||||||| || || |
Sbjct 53133 GCAGGTTAAGGCCAAGATCTTGGAGCGCATGGCAGAGTGGAGCGAGATGTTTGCGAGCGA 53074
Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121
|| ||| | || |||||| || || ||| ||| ||| ||| | || ||| || |
Sbjct 53073 TCCGGATTTGGGAATCATGCAGGGAGCTTATCTGAAGCTCAAGTCTCAGAGTA--TGCAA 53016
Query 122 TCAACTCTGGTTCGTTGGGAGCACTGACCA-----ACGTG---TTGTAGACCCTAACCTG 173
|| | | || ||| | || ||| || | | |||| ||||||||
Sbjct 53015 GCACCAT--GCTCATTGTAGCCTCTTCCCATGCTCACCTTAATTACTAGATCCTAACCTC 52958
Query 174 CGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAG 233
||||| || || || || ||||||||||||||||| || ||| |||||||| || |||
Sbjct 52957 CGACCACCCTCCAAGCCCCAGAAGACCCAGATCACCGAAGTGGATCGCCAGAAAGAGGAG 52898
Query 234 GAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAA---AGCGGGACCGAGCCATCC 290
||||| | |||||||| ||||| | || | ||||| | || || || ||
Sbjct 52897 GAGGAATTGCAGATGGCTCTGGCCATGTCTATAAAGGAGTCGAAAGGCTCCAGTCCTTCA 52838
Query 291 GCCGCCAGGTCCAACCAGCCGCAAGCAAAAGCCCCACA---ACAATCCGCCCCGGAACAA 347
|| || | ||| || || || | | || | || ||| || || | || |
Sbjct 52837 GCAGCGAAGTCAAATGCTCCTCAGGAAGCAGGCTCAAGCTCACAGTCTGCGCAAACACCA 52778
Query 348 GAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCC 407
| | | ||| || || |||||||| ||||| || || |||||||| || ||
Sbjct 52777 CAACC-CGTCA-------GC-TCAGGAACCACTGCAGCCACTGTTTCCCGCGTACGGGCA 52727
Query 408 CTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATT 467
| | ||||||| || || || || || || || ||||| ||||||||||| ||
Sbjct 52726 TTGTTCGACTTCCAACCGTCTGAGCCTGGTGAATTACAATTCCGGAAAGGCGACATCATC 52667
Query 468 GCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGC 527
|| || |||||||| ||||||||||| |||||||| || || || || || || || ||
Sbjct 52666 GCTGTGCTCGAGTCCGTGTACAAGGATTGGTGGAAAGGATCGCTCCGAGGCCAAACTGGT 52607
Query 528 ATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGA 587
|| ||||| | || |||||||||||| | || || || |||| ||| ||||| ||||||
Sbjct 52606 ATATTCCCATTGAATTATGTCGAGAAGTTACAAGACCCAACCAGGGAAGAGCTGGAGAGA 52547
Query 588 GAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCT 647
|| || |||||||||| || || ||||| |||| ||| |||||||||||||| |||
Sbjct 52546 GAGGCACAGATGGAGGGAGAGGTGTTTGCACAGATTCGGAATGTGGAGAAGCTGCTCGCT 52487
Query 648 CTGCTGAGCACTAGTTC---------GAGTGCCGACGCTAGGGACAATGAGGAGATCACT 698
|| |||||||| ||||| |||| |||| |||| ||||||||||||||
Sbjct 52486 CTTCTGAGCACGAGTTCCCAAACAGGCGGTGCTGACGTACGGGATAATGAGGAGATCACC 52427
Query 699 TCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTAT 758
||| || ||| ||| || | || |||||||| ||||||||| | || || || ||
Sbjct 52426 GAGCTATATCACTCCACATTGGCAATTCGGCCGAAATTGATCGAGTTGATCGGAAAATAC 52367
Query 759 TCGCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATT------TGT-GTGTTG-GCCAC 810
||||||||||| ||||| ||| ||| | | | || ||| || ||| | |
Sbjct 52366 TCGCAAAAGAAAGGTAA---GAA--TTTCATGAGGCTTGACCCATGTCGTATTGCGGCTA 52312
Query 811 TGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGA 870
||| | ||| ||||||||| |||||||| ||||| ||||||||||| || || || ||
Sbjct 52311 ACATC-TATTCTAGATGATTTTACGCAGCTGAACGAAAAGTTCATCAAAGCCCGTCGAGA 52253
Query 871 CTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCG 927
||||||| | ||||||||||| || ||||| || || | ||||| | ||| || ||
Sbjct 52252 CTACGAATCACTCCTTGAAGCTTCCATGTCCCAGCCTTCCCAGCCTGTCTATGGCCG 52196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945467277795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |