Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq63 383 5e-103 >seq63 Length=103183 Score = 383 bits (424), Expect = 5e-103 Identities = 665/957 (69%), Gaps = 50/957 (5%) Strand=Plus/Minus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| | ||||| |||||| | ||||| |||| || |||| |||||||| || || | Sbjct 53133 GCAGGTTAAGGCCAAGATCTTGGAGCGCATGGCAGAGTGGAGCGAGATGTTTGCGAGCGA 53074 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121 || ||| | || |||||| || || ||| ||| ||| ||| | || ||| || | Sbjct 53073 TCCGGATTTGGGAATCATGCAGGGAGCTTATCTGAAGCTCAAGTCTCAGAGTA--TGCAA 53016 Query 122 TCAACTCTGGTTCGTTGGGAGCACTGACCA-----ACGTG---TTGTAGACCCTAACCTG 173 || | | || ||| | || ||| || | | |||| |||||||| Sbjct 53015 GCACCAT--GCTCATTGTAGCCTCTTCCCATGCTCACCTTAATTACTAGATCCTAACCTC 52958 Query 174 CGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAG 233 ||||| || || || || ||||||||||||||||| || ||| |||||||| || ||| Sbjct 52957 CGACCACCCTCCAAGCCCCAGAAGACCCAGATCACCGAAGTGGATCGCCAGAAAGAGGAG 52898 Query 234 GAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAA---AGCGGGACCGAGCCATCC 290 ||||| | |||||||| ||||| | || | ||||| | || || || || Sbjct 52897 GAGGAATTGCAGATGGCTCTGGCCATGTCTATAAAGGAGTCGAAAGGCTCCAGTCCTTCA 52838 Query 291 GCCGCCAGGTCCAACCAGCCGCAAGCAAAAGCCCCACA---ACAATCCGCCCCGGAACAA 347 || || | ||| || || || | | || | || ||| || || | || | Sbjct 52837 GCAGCGAAGTCAAATGCTCCTCAGGAAGCAGGCTCAAGCTCACAGTCTGCGCAAACACCA 52778 Query 348 GAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCC 407 | | | ||| || || |||||||| ||||| || || |||||||| || || Sbjct 52777 CAACC-CGTCA-------GC-TCAGGAACCACTGCAGCCACTGTTTCCCGCGTACGGGCA 52727 Query 408 CTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATT 467 | | ||||||| || || || || || || || ||||| ||||||||||| || Sbjct 52726 TTGTTCGACTTCCAACCGTCTGAGCCTGGTGAATTACAATTCCGGAAAGGCGACATCATC 52667 Query 468 GCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGC 527 || || |||||||| ||||||||||| |||||||| || || || || || || || || Sbjct 52666 GCTGTGCTCGAGTCCGTGTACAAGGATTGGTGGAAAGGATCGCTCCGAGGCCAAACTGGT 52607 Query 528 ATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGA 587 || ||||| | || |||||||||||| | || || || |||| ||| ||||| |||||| Sbjct 52606 ATATTCCCATTGAATTATGTCGAGAAGTTACAAGACCCAACCAGGGAAGAGCTGGAGAGA 52547 Query 588 GAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCT 647 || || |||||||||| || || ||||| |||| ||| |||||||||||||| ||| Sbjct 52546 GAGGCACAGATGGAGGGAGAGGTGTTTGCACAGATTCGGAATGTGGAGAAGCTGCTCGCT 52487 Query 648 CTGCTGAGCACTAGTTC---------GAGTGCCGACGCTAGGGACAATGAGGAGATCACT 698 || |||||||| ||||| |||| |||| |||| |||||||||||||| Sbjct 52486 CTTCTGAGCACGAGTTCCCAAACAGGCGGTGCTGACGTACGGGATAATGAGGAGATCACC 52427 Query 699 TCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTAT 758 ||| || ||| ||| || | || |||||||| ||||||||| | || || || || Sbjct 52426 GAGCTATATCACTCCACATTGGCAATTCGGCCGAAATTGATCGAGTTGATCGGAAAATAC 52367 Query 759 TCGCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATT------TGT-GTGTTG-GCCAC 810 ||||||||||| ||||| ||| ||| | | | || ||| || ||| | | Sbjct 52366 TCGCAAAAGAAAGGTAA---GAA--TTTCATGAGGCTTGACCCATGTCGTATTGCGGCTA 52312 Query 811 TGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGA 870 ||| | ||| ||||||||| |||||||| ||||| ||||||||||| || || || || Sbjct 52311 ACATC-TATTCTAGATGATTTTACGCAGCTGAACGAAAAGTTCATCAAAGCCCGTCGAGA 52253 Query 871 CTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCG 927 ||||||| | ||||||||||| || ||||| || || | ||||| | ||| || || Sbjct 52252 CTACGAATCACTCCTTGAAGCTTCCATGTCCCAGCCTTCCCAGCCTGTCTATGGCCG 52196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945467277795