Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq273 181 3e-42 >seq273 Length=2741725 Score = 181 bits (200), Expect = 3e-42 Identities = 213/287 (74%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || || || ||| | | |||||||| || ||||||||| | |||||||| Sbjct 1413788 GGCACTACCGCCGCCACTGTCAGCAGGGTTCGCGCTCTCTACGACTTCGCACCCTCGGAG 1413729 Query 432 CCCGGCGAGTTGGCTTTC---CGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || || ||| ||| ||| ||| || || | ||||| || || ||| || ||| Sbjct 1413728 CCGGGAGAGCTGGAGTTCAAGCGC---GGTGATGTCATTGCTGTCCTGGAGAGCGTCTAC 1413672 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 ||||| |||||| || || || || |||| || |||||||||||||||||||| Sbjct 1413671 AAGGATTGGTGGCGCGGCTCGCTCAAGGGGAAGACGGGTATCTTCCCCCTCAACTATGTT 1413612 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 |||||||| ||| || ||| ||| ||||| | | || || ||||||||||| ||| Sbjct 1413611 GAGAAGCTCACGGACCCGACCCCGGACGAGCTGCAACGGGAGGCACAGATGGAGGCTGAA 1413552 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655 |||||||| ||||||||||| |||||||||||| | ||||| |||| Sbjct 1413551 GTCTTTGCAGAGATCAAGAATGTGGAGAAGCTGTTGACTCTGTTGAG 1413505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945517157625