Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq6 165 3e-37 >seq6 Length=1479970 Score = 165 bits (182), Expect = 3e-37 Identities = 193/258 (75%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGC-TTTCCGCAAAGG 457 || ||||| || ||||||||| | |||||||| || || ||| ||| ||| || || Sbjct 370964 GTCCGCGCTCTCTACGACTTCGCACCCTCGGAGCCGGGAGAGCTGGAGTTTAAGCGC-GG 370906 Query 458 CGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGG 517 || | ||||| || || ||| || |||||||| |||||| || || || || Sbjct 370905 TGATGTCATTGCTGTCCTGGAGAGCGTCTACAAGGATTGGTGGCGCGGCTCGCTCAAGGG 370846 Query 518 ACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGA 577 |||| || |||||||||||||||||||| |||||||| || || ||| ||| || Sbjct 370845 GAAGACGGGTATCTTCCCCCTCAACTATGTTGAGAAGCTCACAGACCCGACCCCGGACGA 370786 Query 578 GCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAA 637 ||| | | || || ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 370785 GCTGCAACGGGAGGCACAGATGGAGGCCGAAGTCTTTGCAGAGATCAAGAATGTGGAGAA 370726 Query 638 GCTGCTAGCTCTGCTGAG 655 |||| | ||||| |||| Sbjct 370725 GCTGTTGACTCTGTTGAG 370708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945462743265