Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20chlorophyti_20[genbank_20GCA_5F001937105.1_202017- 01-05] 558 sequences; 52,387,045 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq434 188 2e-44 >seq434 Length=400449 Score = 188 bits (208), Expect = 2e-44 Identities = 214/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || ||||| || || || | || || || | || ||||| || ||||| Sbjct 281611 GGCACGACGGCAGCCACGGTGTCAAGAGTACGAGCGTTATATGACTTTGTTCCTTCGGAG 281552 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| | | ||| || ||||| | ||||| || ||||||||||||||||| Sbjct 281551 CCTGGCGAGCTCGAGTTCAAGAAGGGCGATGTGATTGCAGTGCTCGAGTCTGTGTACAAA 281492 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 |||||||||| ||| || || ||| |||| ||||| ||||| |||||||| |||||| Sbjct 281491 GACTGGTGGAGGGGATCGCTCAAGGGAAAGACTGGCATTTTCCCTCTCAACTACGTCGAG 281432 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| || || ||| || ||||| | | | ||||| ||||||||||| || || Sbjct 281431 AAGCTCACAGACCCGACCCCTGATGAGCTGGCGCGTGAAGCACAGATGGAGGCCGAGGTG 281372 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||||| |||||||||||||| |||||||| || | ||| ||||||| Sbjct 281371 TTTGCCGAGATCAAGAACGTCGAGAAGCTACTTACGCTGTTGAGCAC 281325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945502682010