Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq128 165 3e-37 >seq128 Length=55416 Score = 165 bits (182), Expect = 3e-37 Identities = 210/289 (73%), Gaps = 0/289 (0%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || || || || || | || || || | ||||||||| || || | Sbjct 42814 CTGGCACGACGGCTGCCACGGTGTCAAGGGTGCGAGCATTATACGACTTCGTTCCTTCCG 42873 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | || || || | | ||| || ||||| ||||||| || |||||||| || |||| Sbjct 42874 AGCCGGGTGAACTCGAGTTCAAGAAGGGCGATGTTATTGCAGTCCTCGAGTCGGTTTACA 42933 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 |||| |||||| ||| || || || |||| || ||||||||||||||||| |||| Sbjct 42934 AGGATTGGTGGCGGGGCTCGCTCAAGGGGAAGACAGGAATCTTCCCCCTCAACTACGTCG 42993 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 ||||||| ||||| || || ||||| | | | || || ||||||||||| || | Sbjct 42994 AGAAGCTCACAGATCCGACTCCCGATGAGCTGGCGCGTGAGGCGCAGATGGAGGCCGAGG 43053 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 | ||||| ||||||||||| || ||||||||||| | || ||||||| Sbjct 43054 TGTTTGCAGAGATCAAGAATGTCGAGAAGCTGCTCACGCTTTTGAGCAC 43102 Score = 87.8 bits (96), Expect = 6e-14 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 823 AGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCT 882 |||||| || || ||||| || ||||||||||||||||| |||||||||||||| | || Sbjct 43328 AGATGACTTTACACAGCTGAATGAGAAGTTCATCAAGGCTCGCCGCGACTACGAGTCTCT 43387 Query 883 CCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 | | ||| | || |||||||| || | ||||| Sbjct 43388 CTTGGAATCGTCCATGTCGCATCCTCCTCAGCC 43420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945282757305