Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq128 165 3e-37
>seq128
Length=55416
Score = 165 bits (182), Expect = 3e-37
Identities = 210/289 (73%), Gaps = 0/289 (0%)
Strand=Plus/Plus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
|||| || || || || || || || | || || || | ||||||||| || || |
Sbjct 42814 CTGGCACGACGGCTGCCACGGTGTCAAGGGTGCGAGCATTATACGACTTCGTTCCTTCCG 42873
Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489
| || || || | | ||| || ||||| ||||||| || |||||||| || ||||
Sbjct 42874 AGCCGGGTGAACTCGAGTTCAAGAAGGGCGATGTTATTGCAGTCCTCGAGTCGGTTTACA 42933
Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549
|||| |||||| ||| || || || |||| || ||||||||||||||||| ||||
Sbjct 42934 AGGATTGGTGGCGGGGCTCGCTCAAGGGGAAGACAGGAATCTTCCCCCTCAACTACGTCG 42993
Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609
||||||| ||||| || || ||||| | | | || || ||||||||||| || |
Sbjct 42994 AGAAGCTCACAGATCCGACTCCCGATGAGCTGGCGCGTGAGGCGCAGATGGAGGCCGAGG 43053
Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
| ||||| ||||||||||| || ||||||||||| | || |||||||
Sbjct 43054 TGTTTGCAGAGATCAAGAATGTCGAGAAGCTGCTCACGCTTTTGAGCAC 43102
Score = 87.8 bits (96), Expect = 6e-14
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 823 AGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCT 882
|||||| || || ||||| || ||||||||||||||||| |||||||||||||| | ||
Sbjct 43328 AGATGACTTTACACAGCTGAATGAGAAGTTCATCAAGGCTCGCCGCGACTACGAGTCTCT 43387
Query 883 CCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915
| | ||| | || |||||||| || | |||||
Sbjct 43388 CTTGGAATCGTCCATGTCGCATCCTCCTCAGCC 43420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945282757305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |