Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017-
01-13] 8,455 sequences; 59,914,086 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2436 179 1e-41
>seq2436
Length=7030
Score = 179 bits (198), Expect = 1e-41
Identities = 212/287 (74%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| || || || ||||| || || | || || || || ||||||||| ||||||||
Sbjct 6257 GGCACGACGGCTGCTACGGTTTCAAGAGTGCGAGCACTGTACGACTTCGTTCCCTCGGAG 6198
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| |||||| | | ||| || ||||| | |||||||| |||||||| || ||||||
Sbjct 6197 CCGGGCGAGCTCGAGTTCAAGAAGGGCGATGTCATTGCGGTGCTCGAGTCCGTTTACAAG 6138
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|| |||||| |||||| || || |||| || || ||||| || ||||| ||||||
Sbjct 6137 GATTGGTGGCGGGGTTCGCTCAAGGGGAAGACGGGTATTTTCCCTCTTAACTACGTCGAG 6078
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||||| ||| || ||| || ||||| | | || || |||||||| || || ||
Sbjct 6077 AAGCTTACGGACCCGACCCCCGATGAGCTGGCACGCGAGGCCCAGATGGAAGCCGAGGTG 6018
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||||| ||||||||||| || ||||||||||| | ||||||||||
Sbjct 6017 TTTGCAGAGATCAAGAATGTCGAGAAGCTGCTCACATTGCTGAGCAC 5971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944125405725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |