Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq23 165 3e-37
>seq23
Length=145478
Score = 165 bits (182), Expect = 3e-37
Identities = 210/289 (73%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
|||| || || || ||||| || || | || || || | ||||| ||| || || |
Sbjct 85992 CTGGCACGACGGCTGCTACGGTATCAAGGGTGCGAGCATTATACGATTTCGTTCCTTCCG 85933
Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489
| || |||||| | | ||| |||||||| ||||||| || |||||||| || ||||
Sbjct 85932 AGCCGGGCGAGCTCGAGTTCAAGAAAGGCGATGTTATTGCAGTCCTCGAGTCGGTCTACA 85873
Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549
| || |||||| ||| || || ||| |||| ||||| |||||||||||||| || |
Sbjct 85872 AAGATTGGTGGCGGGGCTCGCTCAAGGGAAAGACGGGCATTTTCCCCCTCAACTACGTTG 85813
Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609
||||||| ||||| || || ||||| | | || || ||||||||||| || |
Sbjct 85812 AGAAGCTCACAGATCCGACTCCCGATGAGCTGGCACGCGAGGCACAGATGGAGGCCGAGG 85753
Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
| ||||| ||||| ||||| || ||||||||||| | || |||||||
Sbjct 85752 TGTTTGCAGAGATTAAGAATGTAGAGAAGCTGCTCACCCTCTTGAGCAC 85704
Score = 96.9 bits (106), Expect = 1e-16
Identities = 160/231 (69%), Gaps = 14/231 (6%)
Strand=Plus/Minus
Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760
||| |||||| | || | | || |||| || ||||| ||||||||| ||||| ||
Sbjct 85602 GCTTTACCACCAAACGCTAGCCATCAGGCCAAAACTGATCAAGCTCATTGAGAAGTACTC 85543
Query 761 GCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGT---------TGGCCACT 811
|| ||||||||| || | || | || || | ||||| || |||
Sbjct 85542 ACAGAAGAAGGGTCAGAG--ATGCTCCACTCGCTTGCCTGTGTCCCCTAGACTGACCAAC 85485
Query 812 GATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGAC 871
| | || |||| || || || ||||| || ||||||||||||||||| |||||||||
Sbjct 85484 CAACATG---CAGACGACTTTACACAGCTGAATGAGAAGTTCATCAAGGCTCGCCGCGAC 85428
Query 872 TACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
||||| | ||||| ||| | || |||||||| || | ||||| |||||
Sbjct 85427 TACGAGTCTCTCCTGGAATCGTCCATGTCGCACCCCCCTCAGCCTAGCTAC 85377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945544015995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |