Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq23 165 3e-37 >seq23 Length=145478 Score = 165 bits (182), Expect = 3e-37 Identities = 210/289 (73%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || ||||| || || | || || || | ||||| ||| || || | Sbjct 85992 CTGGCACGACGGCTGCTACGGTATCAAGGGTGCGAGCATTATACGATTTCGTTCCTTCCG 85933 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | || |||||| | | ||| |||||||| ||||||| || |||||||| || |||| Sbjct 85932 AGCCGGGCGAGCTCGAGTTCAAGAAAGGCGATGTTATTGCAGTCCTCGAGTCGGTCTACA 85873 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 | || |||||| ||| || || ||| |||| ||||| |||||||||||||| || | Sbjct 85872 AAGATTGGTGGCGGGGCTCGCTCAAGGGAAAGACGGGCATTTTCCCCCTCAACTACGTTG 85813 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 ||||||| ||||| || || ||||| | | || || ||||||||||| || | Sbjct 85812 AGAAGCTCACAGATCCGACTCCCGATGAGCTGGCACGCGAGGCACAGATGGAGGCCGAGG 85753 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 | ||||| ||||| ||||| || ||||||||||| | || ||||||| Sbjct 85752 TGTTTGCAGAGATTAAGAATGTAGAGAAGCTGCTCACCCTCTTGAGCAC 85704 Score = 96.9 bits (106), Expect = 1e-16 Identities = 160/231 (69%), Gaps = 14/231 (6%) Strand=Plus/Minus Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760 ||| |||||| | || | | || |||| || ||||| ||||||||| ||||| || Sbjct 85602 GCTTTACCACCAAACGCTAGCCATCAGGCCAAAACTGATCAAGCTCATTGAGAAGTACTC 85543 Query 761 GCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGT---------TGGCCACT 811 || ||||||||| || | || | || || | ||||| || ||| Sbjct 85542 ACAGAAGAAGGGTCAGAG--ATGCTCCACTCGCTTGCCTGTGTCCCCTAGACTGACCAAC 85485 Query 812 GATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGAC 871 | | || |||| || || || ||||| || ||||||||||||||||| ||||||||| Sbjct 85484 CAACATG---CAGACGACTTTACACAGCTGAATGAGAAGTTCATCAAGGCTCGCCGCGAC 85428 Query 872 TACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 ||||| | ||||| ||| | || |||||||| || | ||||| ||||| Sbjct 85427 TACGAGTCTCTCCTGGAATCGTCCATGTCGCACCCCCCTCAGCCTAGCTAC 85377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945544015995