Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1464 165 3e-37 >seq1464 Length=99067 Score = 165 bits (182), Expect = 3e-37 Identities = 210/289 (73%), Gaps = 0/289 (0%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || || || || || | || || || | ||||| || || || | Sbjct 37934 CTGGCACGACGGCTGCCACGGTGTCAAGGGTGCGAGCATTATACGATTTTGTTCCTTCCG 37993 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | || || || | | ||| || ||||| ||||||| || |||||||| || |||| Sbjct 37994 AGCCGGGTGAACTCGAGTTCAAGAAGGGCGATGTTATTGCAGTCCTCGAGTCGGTTTACA 38053 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 |||| |||||| ||| || || ||| |||| || ||||||||||||||||| |||| Sbjct 38054 AGGATTGGTGGCGGGGCTCGCTCAAGGGAAAGACGGGTATCTTCCCCCTCAACTACGTCG 38113 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 ||||||| ||||| || || ||||| | | | || || |||||||||||||| | Sbjct 38114 AGAAGCTCACAGATCCGACTCCCGATGAGCTGGCGCGTGAGGCGCAGATGGAGGCGGAGG 38173 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 | ||||| ||||||||||| || ||||||||||| | || ||||||| Sbjct 38174 TGTTTGCAGAGATCAAGAATGTCGAGAAGCTGCTCACGCTTTTGAGCAC 38222 Score = 87.8 bits (96), Expect = 6e-14 Identities = 154/222 (69%), Gaps = 12/222 (5%) Strand=Plus/Plus Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760 ||| |||||| | || || | || |||||||| ||||| |||| |||| ||||| || Sbjct 38324 GCTCTACCACCAAACGCTGGCCATCAGGCCGAAGCTGATCAAGCTTATTGAGAAGTACTC 38383 Query 761 GCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGTTGGCCA--CTGATC--- 815 || ||||||||| || | || || | | | | || || | |||| | Sbjct 38384 CCAGAAGAAGGGTCAGAG--ATGCCCCACTCACTTGTCTATGCTGCTTATACTGACCAAG 38441 Query 816 --GTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTA 873 |||| |||||| || || ||||| || ||||||||||||||||| ||||||||||| Sbjct 38442 ATGTGT---AGATGACTTTACACAGCTGAATGAGAAGTTCATCAAGGCTCGCCGCGACTA 38498 Query 874 CGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 || | || | ||| | || |||||||| || | ||||| Sbjct 38499 TGAGTCTCTTTTGGAATCGTCCATGTCGCATCCTCCTCAGCC 38540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945115851720