Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq114 197 4e-47 >seq114 Length=179700 Score = 197 bits (218), Expect = 4e-47 Identities = 216/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || ||||| ||||| || || | || || || || ||||| ||| ||||| || Sbjct 76612 GGCACGACAGCTGCTACGGTTTCGAGAGTGCGAGCACTATACGATTTCGTTCCCTCAGAG 76553 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| ||| ||| || ||||| | |||||||| |||||||| || |||||| Sbjct 76552 CCAGGCGAGCTGGAGTTCAAGAAGGGCGATGTCATTGCGGTGCTCGAGTCCGTTTACAAG 76493 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| |||||| || || |||| || || ||||| |||||||| |||||| Sbjct 76492 GATTGGTGGCGGGGTTCGCTCAAGGGGAAGACGGGTATTTTCCCTCTCAACTACGTCGAG 76433 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||| || ||| || ||||| | | ||||||| |||||||| || || || Sbjct 76432 AAGCTCACGGACCCGACCCCCGATGAGCTGGCGCGAGAAGCCCAGATGGAAGCCGAGGTG 76373 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||||| |||||||||||||| |||||||| || | |||||||||| Sbjct 76372 TTTGCAGAGATCAAGAACGTCGAGAAGCTACTCACCTTGCTGAGCAC 76326 Score = 107 bits (118), Expect = 6e-20 Identities = 159/225 (71%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760 ||| |||||| |||| || |||| | |||||| ||||| ||||||||| ||||| || Sbjct 76219 GCTTTACCACCAGACGCTGGCGATTAGACCGAAGCTGATCAAGCTCATTGAGAAGTACTC 76160 Query 761 GCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACT---GATCGT 817 ||| ||||| ||| | | | || || | | | | |||| | || | Sbjct 76159 GCAGAAGAAAGGTGGGCAGGCCGCTATAGCCGTTCTACTCGGATAGCCATTATTGACCAC 76100 Query 818 GTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877 ||||||||||||| ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 76099 AACGCAGATGATTTCACACAGCTGAACGAAAAGTTCATCAAGGCTCGCCGTGACTACGAG 76040 Query 878 ACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 | || ||||| | || |||||||| || | ||||| ||||| Sbjct 76039 TCGCTACTTGAGTCTTCCATGTCGCATCCTCCTCAGCCAAGCTAC 75995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945504426060