Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq813 237 5e-59 >seq813 Length=186750 Score = 237 bits (262), Expect = 5e-59 Identities = 304/414 (73%), Gaps = 10/414 (2%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || |||||||| || || || || |||||| || || || |||||||| ||| Sbjct 52402 TCGGGAACCACCGCCGCCACGGTGAGCCGCGTGCGTGCGCTCTACGACTTTGTGCCGAGC 52343 Query 429 GAACCCGGCGAGTTGGCTTTC---CGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTG 485 || || |||||| ||| ||| ||| || || | || || || || ||| ||| Sbjct 52342 GAGCCTGGCGAGCTGGAGTTCAAGCGC---GGGGATGTGATCGCCGTGCTGGAGAGCGTG 52286 Query 486 TACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTAT 545 ||||||||||||||| ||| || || |||| |||||||||||||||||||| Sbjct 52285 TACAAGGACTGGTGGCGGGGCAGCCTCAAGGGCAAGACGGGCATCTTCCCCCTCAACTAC 52226 Query 546 GTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCG 605 |||||||| || ||| || || |||||||| || | || || ||||||||||| Sbjct 52225 GTCGAGAAACTCACGGACCCGACGCCCGAGGAGCTGCAGCGCGAGGCGCAGATGGAGGCC 52166 Query 606 GAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCG 665 || || ||||| |||||||||||||| ||||||||| | | ||||||||||| | | | Sbjct 52165 GAGGTGTTTGCCGAGATCAAGAACGTCGAGAAGCTGTTGACACTGCTGAGCACCA-ATAG 52107 Query 666 AGTGCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGA 723 | ||| ||| || |||||||||||||||| | |||||||||| |||| || | | Sbjct 52106 CGCCCCG-CGCGAGGAGGACAATGAGGAGATCTCCAAGCTGTACCACCAGACGCTGGCAA 52048 Query 724 TACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT 777 | ||||| ||| ||||| || | |||| ||||| ||||||||||||||| ||| Sbjct 52047 TCCGGCCAAAGCTGATCAAGTTGATTGAGAAGTACTCGCAAAAGAAGGGTGAGT 51994 Score = 82.4 bits (90), Expect = 2e-12 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 |||| |||||||| || ||||| |||||||||||||||||||| | || ||||| || Sbjct 51913 CAGAGGATTTCACCCAACTCAATGAGAAGTTCATCAAGGCACGGAGAGATTACGAGGCCT 51854 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCC 916 | || || |||| ||| | || ||| |||||||| Sbjct 51853 TGCTCGAGTCCTCCATGGCACACCCACCGCAGCCC 51819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945195729210