Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq813 237 5e-59
>seq813
Length=186750
Score = 237 bits (262), Expect = 5e-59
Identities = 304/414 (73%), Gaps = 10/414 (2%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| |||||||| || || || || |||||| || || || |||||||| |||
Sbjct 52402 TCGGGAACCACCGCCGCCACGGTGAGCCGCGTGCGTGCGCTCTACGACTTTGTGCCGAGC 52343
Query 429 GAACCCGGCGAGTTGGCTTTC---CGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTG 485
|| || |||||| ||| ||| ||| || || | || || || || ||| |||
Sbjct 52342 GAGCCTGGCGAGCTGGAGTTCAAGCGC---GGGGATGTGATCGCCGTGCTGGAGAGCGTG 52286
Query 486 TACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTAT 545
||||||||||||||| ||| || || |||| ||||||||||||||||||||
Sbjct 52285 TACAAGGACTGGTGGCGGGGCAGCCTCAAGGGCAAGACGGGCATCTTCCCCCTCAACTAC 52226
Query 546 GTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCG 605
|||||||| || ||| || || |||||||| || | || || |||||||||||
Sbjct 52225 GTCGAGAAACTCACGGACCCGACGCCCGAGGAGCTGCAGCGCGAGGCGCAGATGGAGGCC 52166
Query 606 GAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCG 665
|| || ||||| |||||||||||||| ||||||||| | | ||||||||||| | | |
Sbjct 52165 GAGGTGTTTGCCGAGATCAAGAACGTCGAGAAGCTGTTGACACTGCTGAGCACCA-ATAG 52107
Query 666 AGTGCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGA 723
| ||| ||| || |||||||||||||||| | |||||||||| |||| || | |
Sbjct 52106 CGCCCCG-CGCGAGGAGGACAATGAGGAGATCTCCAAGCTGTACCACCAGACGCTGGCAA 52048
Query 724 TACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT 777
| ||||| ||| ||||| || | |||| ||||| ||||||||||||||| |||
Sbjct 52047 TCCGGCCAAAGCTGATCAAGTTGATTGAGAAGTACTCGCAAAAGAAGGGTGAGT 51994
Score = 82.4 bits (90), Expect = 2e-12
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881
|||| |||||||| || ||||| |||||||||||||||||||| | || ||||| ||
Sbjct 51913 CAGAGGATTTCACCCAACTCAATGAGAAGTTCATCAAGGCACGGAGAGATTACGAGGCCT 51854
Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCC 916
| || || |||| ||| | || ||| ||||||||
Sbjct 51853 TGCTCGAGTCCTCCATGGCACACCCACCGCAGCCC 51819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945195729210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |