Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq178 407 5e-110 >seq178 Length=346897 Score = 407 bits (450), Expect = 5e-110 Identities = 667/948 (70%), Gaps = 45/948 (5%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||||| |||||||| ||||| |||| |||||||| || ||||| | || | |||| Sbjct 121283 TCAAGGCCAAGATCCTTGAGCGCATGGCAGAATGGACCGAAATGTTTTCTCGTGATCCTG 121342 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAAC 126 | || ||||||||| || ||||||| ||| ||| | || ||| || || || | Sbjct 121343 ACCTAGGCATCATGTCCGGCGCATATATGAAGCTCAAGTCGCAGAGTATGT-TG-TCTGC 121400 Query 127 TCTGGT--TCGT-TGGGA--GCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCC 181 || | |||| || | || || || | | ||| || ||||| || | || Sbjct 121401 TCCAGCAGTCGTGTGACATGGCGCTTACACAAGAC----AGATCCCAACCTCCGCGCGCC 121456 Query 182 GTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCT 241 || || || ||||| || ||||| | || | || || ||||||||||||||||| || Sbjct 121457 CTCAAAGCCACAGAAAACACAGATTTCCGAAGCCGAGCGACAGAAGGAAGAGGAGGAACT 121516 Query 242 ACAGATGGCGCTGGCACTCTCCGTCAAGGA----AAG----CGGGACCGAGCCATCCGCC 293 |||||||| || || | || | | || ||| ||| ||||| | ||| Sbjct 121517 GCAGATGGCTCTTGCTATGTCAATAAGAGAGTCCAAGGGCGCGGCACCGA-----CGGCC 121571 Query 294 GCCAGGTCCAACCAGCCGCAAGCAAAA--GCCCCACAACAATCCGCCCCGGAACAAGAGC 351 ||||| |||||| | || || ||||| | || | | | | || | || | || | | Sbjct 121572 GCCAGTTCCAACAACCCTCA-GCAAAGCGGGTCCGGATCCAGC-GCACAGGCAGAACAAC 121629 Query 352 -AGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTT 410 |||| ||| | | | || || || || || || || || ||||| || || || || Sbjct 121630 CAGCA-CAATCGGTGCCTTCAGGCACAACCGCTGCGACTGTGTCCCGGGTACGGGCGCTG 121688 Query 411 TACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCG 470 | ||||||| ||| || ||||| ||||| || |||||||| |||||||| |||||| Sbjct 121689 TTCGACTTCCAGCCATCAGAACCTGGCGAACTGCAGTTCCGCAAGGGCGACATCATTGCG 121748 Query 471 GTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATC 530 || ||||| || || ||||||||||||||||| || || || || |||||||| || ||| Sbjct 121749 GTCCTCGAATCGGTTTACAAGGACTGGTGGAAAGGATCGCTCCGCGGACAGACTGGTATC 121808 Query 531 TTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAA 590 || || |||||||| || |||||||||||||||||||| |||||||||||| | ||| Sbjct 121809 TTTCCACTCAACTACGTGGAGAAGCTGCAGGATCCTACGCGTGAGGAGCTCGAGCGGGAA 121868 Query 591 GCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTG 650 || |||| ||||| || || |||||| | |||| |||||| ||||||||||| |||||| Sbjct 121869 GCGCAGAATGAGGCTGAGGTGTTTGCGCAAATCAGGAACGTAGAGAAGCTGCTTGCTCTG 121928 Query 651 CTGAGCACTAGTTCG---------AGTGCCGACGCTAGGGACAATGAGGAGATCACTTCG 701 ||||||||||| ||| ||| ||||| |||| |||||||||||||| Sbjct 121929 CTGAGCACTAGCTCGCAACCTGGCGGTGGTGACGCACGGGATAATGAGGAGATCACAGAA 121988 Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761 || || ||| |||| || |||| |||| |||||||| ||||||||||||||||| ||| Sbjct 121989 CTCTATCACTCGACATTGGCGATTAGGCCAAAGTTGATTGAGCTCATTGGCAAGTACTCG 122048 Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTC 821 || ||||| |||| || | | ||| | | | | || ||| | | Sbjct 122049 CAGAAGAAAGGTATGT----TTGTCGACGTCAGCAGCCATATCGAAAGCTAATCATAT-- 122102 Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 |||| || || || ||| | ||||| ||||||||||| || || || ||||| || || Sbjct 122103 CAGACGACTTTACACAGTTGAACGAAAAGTTCATCAAAGCCCGTCGAGACTATGAGTCCA 122162 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCGTC 929 | || || || || |||||||| || ||| || ||| ||| ||| Sbjct 122163 TGCTGGAGGCATCCATGTCGCAGCCTCAGCAACCTCCCTATGGTGGTC 122210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945534772530