Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq532 242 1e-60 >seq532 Length=340523 Score = 242 bits (268), Expect = 1e-60 Identities = 399/566 (70%), Gaps = 16/566 (3%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || || || || |||||| ||||| || |||||||| ||| || Sbjct 102480 TCGGGCACTACCGCGGCGACGGTGAGCCGCGTACGCGCTCTGTACGACTTTGTGCCGTCA 102539 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || ||||||||| ||| ||| |||||| |||| ||||| | ||| ||||||| Sbjct 102540 GAGCCCGGCGAGCTGGAGTTCAAGCGGGGCGACGTTATCGCGGTCTTGGAGAGTGTGTAC 102599 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 |||||||||||| ||| || || || |||| ||||||||||| || |||||||| Sbjct 102600 AAGGACTGGTGGCGGGGCTCCTTGAAGGGCAAGACTGGCATCTTCCCTCTGAACTATGTT 102659 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 |||||| || |||||| || || ||| | || | || || ||||||||||| || Sbjct 102660 GAGAAGTTGACGGATCCCACGCCTGATGAGTTGCAGCGCGAGGCGCAGATGGAGGCCGAG 102719 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 ||||| || |||||||||||||| |||||| || | | |||||||||| | | | Sbjct 102720 GTCTTCGCCGAGATCAAGAACGTCGAGAAGTTGTTGACGTTGCTGAGCACGA-ACAGCGC 102778 Query 669 GCCGACGCTAGG--GACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATAC 726 |||| || ||| ||||| ||||| ||| | ||| || || |||| || | || | Sbjct 102779 GCCG-CGGGAGGAAGACAACGAGGAAATCTCGAAGCTATATCATCAGACGTTGGCCATTC 102837 Query 727 GGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG---TG---GA 780 |||| ||| ||||| |||| || | ||||| || || ||||||||| || || | Sbjct 102838 GGCCCAAGCTGATCAAGCTGATCGAGAAGTACTCACAGAAGAAGGGTGAGGCTTGCGCGT 102897 Query 781 ATCTTTTACGC---GAATTTGTGTGTTG-GCCACTGATCGTGTTCCAGATGATTTCACGC 836 ||| | || | | | |||| | | | || | ||| ||||||| ||||| | Sbjct 102898 ATC-CAAAAGCATAGGAAGGGGGTGTCGAGGCTAACAT-GCGTTACAGATGACTTCACCC 102955 Query 837 AGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGA 896 | || |||||||| ||||| ||||| ||| | ||||||||| | | |||||| |||| | Sbjct 102956 AACTGAACGAGAAATTCATAAAGGCGCGCAGAGACTACGAAGCTTTACTTGAATCCTCTA 103015 Query 897 TGTCGCAACCAGCGCAGCCCGGCTAC 922 |||| || || | ||| || |||| Sbjct 103016 TGTCACACCCTCCACAGTCCAACTAC 103041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945184392885