Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq146 277 6e-71 >seq146 Length=308001 Score = 277 bits (306), Expect = 6e-71 Identities = 407/570 (71%), Gaps = 16/570 (3%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || ||||| || || || || || |||||| |||||||| |||||||| ||| || Sbjct 87179 TCAGGAACTACGGCGGCGACGGTGAGCCGCGTGCGCGCCCTGTACGACTTTGTGCCGTCA 87120 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || ||||||||| | | ||| | ||||| | ||||| || || ||| |||||| Sbjct 87119 GAGCCCGGCGAGCTTGAGTTCAAGAGGGGCGATGTCATTGCTGTGCTGGAGAGCGTGTAC 87060 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 |||||||||||| ||| |||||| || |||| ||||| ||||| || ||||| || Sbjct 87059 AAGGACTGGTGGCGGGGCTCTCTGAAGGGCAAGACGGGCATTTTCCCTCTGAACTACGTG 87000 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 |||||| || ||| || || || ||| | || |||| || ||||||||||| || Sbjct 86999 GAGAAGTTGACGGACCCCACGCCCGACGAGTTGCAGCGAGAGGCACAGATGGAGGCCGAG 86940 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 |||||||| |||||||||||||| |||||||| | | || |||||||| | | | Sbjct 86939 GTCTTTGCCGAGATCAAGAACGTCGAGAAGCTATTGACGCTCCTGAGCAC-AAACAGCGC 86881 Query 669 GCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATAC 726 |||| || || |||||| |||||||| | |||||||||| |||| || |||| | Sbjct 86880 GCCG-CGGGAGGAGGACAACGAGGAGATTTCGAAGCTGTACCACCAGACGTTGGCGATCC 86822 Query 727 GGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT----GGAAT 782 | || ||| ||||| |||| || | ||||| || || ||||||||| ||| || Sbjct 86821 GACCCAAGCTGATCAAGCTGATCGAGAAGTACTCACAGAAGAAGGGTGAGTCTTGCGAGA 86762 Query 783 CTT-TTACGCGAATTTGTGTGTTGGCCA--CTGA-----TCGTGTTCCAGATGATTTCAC 834 ||| | ||||| | || | | | | || | | | || |||| || ||||| Sbjct 86761 CTTCAAAGGCGAAGGAGAGTATGGTCAAGGCTAACTAACTTGCGTCGCAGACGACTTCAC 86702 Query 835 GCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTC 894 || || |||||||| ||||||||||||||| | ||||| ||| || | || ||| |||| Sbjct 86701 TCAACTGAACGAGAAATTCATCAAGGCACGCAGGGACTATGAAGCCTTGCTCGAATCCTC 86642 Query 895 GATGTCGCAACCAGCGCAGCCCGGCTACGG 924 |||||||| ||| | ||| || ||| || Sbjct 86641 CATGTCGCACCCACCACAGTCCAACTATGG 86612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945442337880