Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq76 255 2e-64 >seq76 Length=31473 Score = 255 bits (282), Expect = 2e-64 Identities = 396/557 (71%), Gaps = 14/557 (3%) Strand=Plus/Plus Query 361 CTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCA 420 |||| | || || || || || || || || ||| || ||||| || ||||||||| Sbjct 15426 CTATGCCGTCGGGGACTACTGCGGCGACGGTGAGCCGAGTGCGCGCTCTGTACGACTTCG 15485 Query 421 CGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGT 480 ||| || || ||||||||| ||| ||| | ||||| |||| ||||| | ||| Sbjct 15486 TGCCGTCTGAGCCCGGCGAGCTGGAGTTCAAGAGGGGCGATGTTATCGCGGTCTTGGAGA 15545 Query 481 CTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCA 540 || ||||||||||||||| ||||| ||| || |||| ||||||||||| || | Sbjct 15546 GCGTATACAAGGACTGGTGGCGCGGTTCCCTGAAGGGCAAGACGGGCATCTTCCCTCTGA 15605 Query 541 ACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGG 600 |||||||||||||| || ||| ||||| || ||||| || | || || ||||||| Sbjct 15606 ACTATGTCGAGAAGTTGACGGACCCTACTCCTGATGAGCTGCAGCGCGAGGCGCAGATGG 15665 Query 601 AGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTA 660 |||| || ||||| || ||||| |||||||| |||||||| | | ||||||||||| | Sbjct 15666 AGGCCGAGGTCTTCGCCGAGATTAAGAACGTCGAGAAGCTCTTGACGCTGCTGAGCACGA 15725 Query 661 GTTCGAGTGCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGT 718 | | |||| || || |||||||||||||||| | |||||| ||| |||| | Sbjct 15726 -ACAGCGCGCCG-CGAGAGGAGGACAATGAGGAGATCTCGAAGCTGTATCACCAGACGCT 15783 Query 719 GTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG-- 776 | | || ||||||||| | ||| || | || | ||||| ||||| ||||||||| || Sbjct 15784 GGCCATCCGGCCGAAGCTCATCAAGTTGATCGAGAAGTACTCGCAGAAGAAGGGTGAGCC 15843 Query 777 TG----GAATCTTTTACGCGAATTTGTGTGTTGGCCA--CTGA-TCGTGTTCCAGATGAT 829 || ||||| ||| | | | | ||| || | || | ||||||| Sbjct 15844 TGGCGCGAATC-CCAGGGCGGAAGAAGGGGGCGTCCAAGCTAACACGGCTCACAGATGAC 15902 Query 830 TTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAA 889 |||||||| | |||||||| ||||||||||||||| | ||||| || || | || || Sbjct 15903 TTCACGCAATTAAACGAGAAATTCATCAAGGCACGCAGGGACTATGAGGCCTTACTGGAG 15962 Query 890 GCCTCGATGTCGCAACC 906 |||| ||||| || || Sbjct 15963 TCCTCCATGTCACATCC 15979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945273688245