Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq11481 260 4e-66 >seq11481 Length=2897 Score = 260 bits (288), Expect = 4e-66 Identities = 401/569 (70%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || |||||||| || || || || |||||| |||||||| |||||||| ||| || Sbjct 728 TCGGGAACCACGGCGGCGACGGTGAGCCGCGTACGCGCCCTGTACGACTTTGTGCCTTCA 669 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || ||||||||| | | ||| | |||||| | ||||| || || ||| || || Sbjct 668 GAGCCCGGCGAGCTTGAATTCAAGAGGGGCGACGTCATTGCTGTGCTGGAGAGCGTATAT 609 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 |||||||||||| ||| || ||| || |||| ||||||||||| || ||||| || Sbjct 608 AAGGACTGGTGGCGGGGCTCGCTGAAGGGCAAGACGGGCATCTTCCCTCTGAACTACGTG 549 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 |||||| || ||| || || || ||| | || |||| ||||||||||| || || Sbjct 548 GAGAAGTTGACGGACCCCACGCCCGACGAGTTGCAGCGAGAGGCTCAGATGGAAGCCGAG 489 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 |||||||| |||||||||||||| ||||||||| | | || || ||||| | | | Sbjct 488 GTCTTTGCCGAGATCAAGAACGTCGAGAAGCTGTTGACGCTCCTCAGCAC-AAACAGCGC 430 Query 669 GCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATAC 726 |||| || || |||||| ||||||||| | |||||||||| |||| ||||||| | Sbjct 429 GCCG-CGGGAGGAGGACAACGAGGAGATCTCGAAGCTGTACCACCAGACGCTGTCGATCC 371 Query 727 GGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT----GGAAT 782 |||| ||| ||||| || | || | ||||| || || ||||||||| ||| || Sbjct 370 GGCCCAAGCTGATCAAGTTGATCGAGAAGTACTCACAGAAGAAGGGTGAGTCTCACGAGA 311 Query 783 CTTTTACGCGAATTTGTGTGTTGGCCACTGA-------TCGTGTTCCAGATGATTTCACG 835 ||| | | || | ||| | || ||| |||| || ||||| Sbjct 310 CTTCAAAGGCGATGGAAGGATTGATAAACGAGGCTAACATGTGGCACAGACGACTTCACT 251 Query 836 CAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCG 895 || || || ||||| ||||||||||||||| | || || ||| | | || ||| |||| Sbjct 250 CAACTGAATGAGAAATTCATCAAGGCACGCAGGGATTATGAAGCTTTACTCGAATCCTCC 191 Query 896 ATGTCGCAACCAGCGCAGCCCGGCTACGG 924 |||||||| ||| | ||| || |||||| Sbjct 190 ATGTCGCACCCACCACAGTCCAACTACGG 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15943266112290