Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq556 269 8e-69
>seq556
Length=684303
Score = 269 bits (298), Expect = 8e-69
Identities = 404/567 (71%), Gaps = 14/567 (2%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || || || || || ||| |||||| |||||||| ||||| || ||| ||
Sbjct 157537 TCGGGGACTACGGCGGCGACGGTCAGCCGCGTACGCGCCCTGTACGATTTTGTGCCGTCA 157478
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| |||||||| | | ||| | |||||| ||||||| || || ||| ||||||
Sbjct 157477 GAGCCCGGCGAACTCGAGTTCAAGAGGGGCGACGTTATTGCTGTGCTGGAGAGCGTGTAC 157418
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
|||||||||||| |||||||||| || |||| |||||||||||||| ||||| ||
Sbjct 157417 AAGGACTGGTGGCGGGGTTCTCTGAAGGGCAAGACGGGCATCTTCCCCCTAAACTACGTG 157358
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
|||||| || ||| || || || ||| | || |||| || ||||||||||| ||
Sbjct 157357 GAGAAGTTGACGGACCCCACGCCCGACGAGTTGCAGCGAGAGGCACAGATGGAGGCCGAG 157298
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668
|||||||| |||||||||||||| |||||||| | | || || ||||| | | |
Sbjct 157297 GTCTTTGCCGAGATCAAGAACGTCGAGAAGCTCTTGACGCTCCTTAGCAC-AAACAGCGC 157239
Query 669 GCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATAC 726
|||| || || |||||| |||||||| | |||||||||| |||| || |||| |
Sbjct 157238 GCCG-CGGGAGGAGGACAACGAGGAGATTTCGAAGCTGTACCACCAGACGTTGGCGATCC 157180
Query 727 GGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT----GGAAT 782
| || ||| ||||| || | || | ||||| || || ||||||||| ||| ||
Sbjct 157179 GACCCAAGCTGATCAAGTTGATCGAGAAGTACTCACAGAAGAAGGGTGAGTCCTGCGAGG 157120
Query 783 CTTT-TACGCGAATTTGTGTGTTGGCCACTGAT----CGTGTTCCAGATGATTTCACGCA 837
||| | ||||| | || || || | | || |||| || ||||| ||
Sbjct 157119 GTTTCAAGGCGAAGGAAAG-ACTGATCAATGCTAACATGCGTCACAGACGACTTCACTCA 157061
Query 838 GCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGAT 897
|| |||||||| ||||||||||||||| | ||||| ||| || | || ||| |||| ||
Sbjct 157060 ACTGAACGAGAAATTCATCAAGGCACGCAGGGACTATGAAGCCTTACTCGAATCCTCCAT 157001
Query 898 GTCGCAACCAGCGCAGCCCGGCTACGG 924
|||||| || | ||| || ||| ||
Sbjct 157000 GTCGCACCCGCCACAGTCCAACTATGG 156974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945428211075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |