Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq556 269 8e-69 >seq556 Length=684303 Score = 269 bits (298), Expect = 8e-69 Identities = 404/567 (71%), Gaps = 14/567 (2%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || || || ||| |||||| |||||||| ||||| || ||| || Sbjct 157537 TCGGGGACTACGGCGGCGACGGTCAGCCGCGTACGCGCCCTGTACGATTTTGTGCCGTCA 157478 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || |||||||| | | ||| | |||||| ||||||| || || ||| |||||| Sbjct 157477 GAGCCCGGCGAACTCGAGTTCAAGAGGGGCGACGTTATTGCTGTGCTGGAGAGCGTGTAC 157418 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 |||||||||||| |||||||||| || |||| |||||||||||||| ||||| || Sbjct 157417 AAGGACTGGTGGCGGGGTTCTCTGAAGGGCAAGACGGGCATCTTCCCCCTAAACTACGTG 157358 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 |||||| || ||| || || || ||| | || |||| || ||||||||||| || Sbjct 157357 GAGAAGTTGACGGACCCCACGCCCGACGAGTTGCAGCGAGAGGCACAGATGGAGGCCGAG 157298 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 |||||||| |||||||||||||| |||||||| | | || || ||||| | | | Sbjct 157297 GTCTTTGCCGAGATCAAGAACGTCGAGAAGCTCTTGACGCTCCTTAGCAC-AAACAGCGC 157239 Query 669 GCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATAC 726 |||| || || |||||| |||||||| | |||||||||| |||| || |||| | Sbjct 157238 GCCG-CGGGAGGAGGACAACGAGGAGATTTCGAAGCTGTACCACCAGACGTTGGCGATCC 157180 Query 727 GGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGT----GGAAT 782 | || ||| ||||| || | || | ||||| || || ||||||||| ||| || Sbjct 157179 GACCCAAGCTGATCAAGTTGATCGAGAAGTACTCACAGAAGAAGGGTGAGTCCTGCGAGG 157120 Query 783 CTTT-TACGCGAATTTGTGTGTTGGCCACTGAT----CGTGTTCCAGATGATTTCACGCA 837 ||| | ||||| | || || || | | || |||| || ||||| || Sbjct 157119 GTTTCAAGGCGAAGGAAAG-ACTGATCAATGCTAACATGCGTCACAGACGACTTCACTCA 157061 Query 838 GCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGAT 897 || |||||||| ||||||||||||||| | ||||| ||| || | || ||| |||| || Sbjct 157060 ACTGAACGAGAAATTCATCAAGGCACGCAGGGACTATGAAGCCTTACTCGAATCCTCCAT 157001 Query 898 GTCGCAACCAGCGCAGCCCGGCTACGG 924 |||||| || | ||| || ||| || Sbjct 157000 GTCGCACCCGCCACAGTCCAACTATGG 156974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945428211075