Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq4 161 3e-36 >seq4 Length=3212107 Score = 161 bits (178), Expect = 3e-36 Identities = 208/287 (72%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || ||||| || || ||||| || || || |||||||| || || || Sbjct 2880689 GGCACGACGGCTGCTACTGTGTCGCGCGTGCGTGCGCTCTACGACTTTGTTCCGTCCGAG 2880748 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| ||| || || ||||| | || ||||| || |||||||| |||||| Sbjct 2880749 CCGGGCGAGCTGGAATTTAAGAAGGGCGATGTCATCGCGGTGCTGGAGTCTGTCTACAAG 2880808 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || || || ||| |||| ||||| ||||| || ||||| ||||| Sbjct 2880809 GATTGGTGGCGAGGATCACTCAAGGGAAAGACAGGCATTTTCCCTCTGAACTACGTCGAA 2880868 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| |||||| || ||| ||||| | | || || || |||||| | || || Sbjct 2880869 AAGCTTACGGATCCGACACCGGATGAGCTGCACCGCGAGGCGCAAATGGAGTCTGAGGTT 2880928 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 || || |||||||||||||| |||||||| || | || |||||||| Sbjct 2880929 TTCGCCGAGATCAAGAACGTTGAGAAGCTACTTACACTCCTGAGCAC 2880975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945594593445