Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq4 161 3e-36
>seq4
Length=3212107
Score = 161 bits (178), Expect = 3e-36
Identities = 208/287 (72%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| || || || ||||| || || ||||| || || || |||||||| || || ||
Sbjct 2880689 GGCACGACGGCTGCTACTGTGTCGCGCGTGCGTGCGCTCTACGACTTTGTTCCGTCCGAG 2880748
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| |||||| ||| || || ||||| | || ||||| || |||||||| ||||||
Sbjct 2880749 CCGGGCGAGCTGGAATTTAAGAAGGGCGATGTCATCGCGGTGCTGGAGTCTGTCTACAAG 2880808
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|| |||||| || || || ||| |||| ||||| ||||| || ||||| |||||
Sbjct 2880809 GATTGGTGGCGAGGATCACTCAAGGGAAAGACAGGCATTTTCCCTCTGAACTACGTCGAA 2880868
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||||| |||||| || ||| ||||| | | || || || |||||| | || ||
Sbjct 2880869 AAGCTTACGGATCCGACACCGGATGAGCTGCACCGCGAGGCGCAAATGGAGTCTGAGGTT 2880928
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
|| || |||||||||||||| |||||||| || | || ||||||||
Sbjct 2880929 TTCGCCGAGATCAAGAACGTTGAGAAGCTACTTACACTCCTGAGCAC 2880975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945594593445
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |