Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq231 275 2e-70
>seq231
Length=1597530
Score = 275 bits (304), Expect = 2e-70
Identities = 378/525 (72%), Gaps = 25/525 (5%)
Strand=Plus/Minus
Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458
|| || || || |||||||| | || || || ||||||||| |||||||| || |
Sbjct 1421720 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 1421661
Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518
||||| |||||||| | |||||||| ||||||||||||||||| ||| || | |||
Sbjct 1421660 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 1421601
Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578
||||| || || ||||| || || ||||| |||||| | ||||| || ||||||||||||
Sbjct 1421600 CAGACTGGAATATTCCCGCTGAATTATGTTGAGAAGATCCAGGACCCAACCAAGGAGGAG 1421541
Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
| ||||| || || ||||||||| | || || || | |||||||||||||| ||||||
Sbjct 1421540 TTAGAGAGGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 1421481
Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686
|| |||| ||||| ||||| || || | || || | |||| |
Sbjct 1421480 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 1421421
Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746
||||| ||| ||| || || ||| || ||||| ||||||||||| ||||||
Sbjct 1421420 GAGGAAGTCAGCGAGCTCTATCAGCGGACGTTGAGCATACGACCGAAGTTGATTGAGCTC 1421361
Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAA-GT----GGAATCTTTTACGCGAATTTGTGT 801
|||| || ||||| ||||| ||||| || | || | |||| | ||
Sbjct 1421360 ATTGCTCGATACTCGCAGAAGAAAGGTAATGTATTCACATTCATCTACGACCA----TGA 1421305
Query 802 GTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGC 861
||||| | | ||| |||||||| ||||||||| | || |||||||||||||||||
Sbjct 1421304 CTTGGCTAAT----GTGCACCAGATGACTTCACGCAGTTGAATGAGAAGTTCATCAAGGC 1421249
Query 862 ACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|| |||||||||||| | | || ||| ||||||||||||||||
Sbjct 1421248 GCGGCGCGACTACGAAGCTTTGCTAGAATCCTCGATGTCGCAACC 1421204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945548376120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |