Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq88 275 2e-70 >seq88 Length=1225826 Score = 275 bits (304), Expect = 2e-70 Identities = 378/525 (72%), Gaps = 25/525 (5%) Strand=Plus/Plus Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || || || || |||||||| | || || || ||||||||| |||||||| || | Sbjct 593738 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 593797 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 ||||| |||||||| | |||||||| ||||||||||||||||| ||| || | ||| Sbjct 593798 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 593857 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 ||||| || || ||||| || || ||||| |||||| | ||||| || |||||||||||| Sbjct 593858 CAGACTGGAATATTCCCGCTGAATTATGTTGAGAAGATCCAGGACCCAACCAAGGAGGAG 593917 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 | ||||| || || ||||||||| | || || || | |||||||||||||| |||||| Sbjct 593918 TTAGAGAGGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 593977 Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686 || |||| ||||| ||||| || || | || || | |||| | Sbjct 593978 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 594037 Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746 ||||| ||| ||| || || ||| || ||||| ||||||||||| |||||| Sbjct 594038 GAGGAAGTCAGCGAGCTCTATCAGCGGACGTTGAGCATACGACCGAAGTTGATTGAGCTC 594097 Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAA-GT----GGAATCTTTTACGCGAATTTGTGT 801 |||| || ||||| ||||| ||||| || | || | |||| | || Sbjct 594098 ATTGCTCGATACTCGCAGAAGAAAGGTAATGTATTCACATTCATCTACGACCA----TGA 594153 Query 802 GTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGC 861 ||||| | | ||| |||||||| ||||||||| | || ||||||||||||||||| Sbjct 594154 CTTGGCTAAT----GTGCACCAGATGACTTCACGCAGTTGAATGAGAAGTTCATCAAGGC 594209 Query 862 ACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || |||||||||||| | | || ||| |||||||||||||||| Sbjct 594210 GCGGCGCGACTACGAAGCTTTGCTAGAATCCTCGATGTCGCAACC 594254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945575408895