Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq220 275 2e-70
>seq220
Length=377434
Score = 275 bits (304), Expect = 2e-70
Identities = 378/525 (72%), Gaps = 25/525 (5%)
Strand=Plus/Minus
Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458
|| || || || |||||||| | || || || ||||||||| |||||||| || |
Sbjct 331461 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 331402
Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518
||||| |||||||| | |||||||| ||||||||||||||||| ||| || | |||
Sbjct 331401 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 331342
Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578
||||| || || ||||| || || ||||| |||||| | ||||| || || |||||||||
Sbjct 331341 CAGACTGGAATATTCCCGCTGAATTATGTGGAGAAGATCCAGGACCCAACTAAGGAGGAG 331282
Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
| ||||| || || ||||||||| | || || || | |||||||||||||| ||||||
Sbjct 331281 TTAGAGAGGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 331222
Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686
|| |||| ||||| ||||| || || | || || | |||| |
Sbjct 331221 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 331162
Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746
|||||| ||| ||| || || || || ||||| ||||||||||| ||||||
Sbjct 331161 GAGGAGGTCAGCGAGCTCTATCAGCGAACGTTGAGCATACGACCGAAGTTGATTGAGCTC 331102
Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAA-GTG----GAATCTTTTACGCGAATTTGTGT 801
|||| || ||||| ||||| ||||| ||| | || | |||| | ||
Sbjct 331101 ATTGCTCGATACTCGCAGAAGAAAGGTAATGTGTTCACATTCATCTACGACCA----TGG 331046
Query 802 GTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGC 861
||||| | | ||| |||||||| ||||||||| | || |||||||||||||||||
Sbjct 331045 CTTGGCTAAT----GTGCACCAGATGACTTCACGCAGTTGAATGAGAAGTTCATCAAGGC 330990
Query 862 ACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|| |||||||||||| | | || ||| ||||||||||||||||
Sbjct 330989 GCGGCGCGACTACGAAGCTTTGCTCGAATCCTCGATGTCGCAACC 330945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945500589150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |