Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq443 250 8e-63 >seq443 Length=483870 Score = 250 bits (276), Expect = 8e-63 Identities = 372/524 (71%), Gaps = 23/524 (4%) Strand=Plus/Plus Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || || || || |||||||| | || || || ||||||||| |||||||| || | Sbjct 152864 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 152923 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 ||||| |||||||| | |||||||| ||||||||||||||||| ||| || | ||| Sbjct 152924 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 152983 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 ||||| || || ||||| || || || || |||||| | ||||| || || ||||||||| Sbjct 152984 CAGACTGGAATATTCCCGCTGAATTACGTTGAGAAGATCCAGGACCCAACTAAGGAGGAG 153043 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 | |||| || || ||||||||| | || || || | |||||||||||||| |||||| Sbjct 153044 TTAGAGACGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 153103 Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686 || |||| ||||| ||||| || || | || || | |||| | Sbjct 153104 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 153163 Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746 ||||| ||| ||| || || || || ||||| ||||||||||| |||||| Sbjct 153164 GAGGAAGTCAGCGAGCTCTATCAGCGAACGTTGAGCATACGACCGAAGTTGATTGAGCTC 153223 Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTTTAC----GCGAATTTGTGTG 802 |||| || ||||| ||||| ||||| || | || | | | ||| || Sbjct 153224 ATTGCTCGATACTCGCAGAAGAAAGGTAA-TGTATTCATATTCATCTACGA--CCATGGC 153280 Query 803 TTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCA 862 ||||| | | ||| |||||||| |||||||| | || || |||||||||||||| Sbjct 153281 TTGGCTAAT----GTGCACCAGATGACTTCACGCAATTGAATGAAAAGTTCATCAAGGCG 153336 Query 863 CGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || |||||||||||| | | || ||| |||||||||||||||| Sbjct 153337 CGGCGCGACTACGAAGCTTTGCTCGAATCCTCGATGTCGCAACC 153380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944983129515