Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq443 250 8e-63
>seq443
Length=483870
Score = 250 bits (276), Expect = 8e-63
Identities = 372/524 (71%), Gaps = 23/524 (4%)
Strand=Plus/Plus
Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458
|| || || || |||||||| | || || || ||||||||| |||||||| || |
Sbjct 152864 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 152923
Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518
||||| |||||||| | |||||||| ||||||||||||||||| ||| || | |||
Sbjct 152924 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 152983
Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578
||||| || || ||||| || || || || |||||| | ||||| || || |||||||||
Sbjct 152984 CAGACTGGAATATTCCCGCTGAATTACGTTGAGAAGATCCAGGACCCAACTAAGGAGGAG 153043
Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
| |||| || || ||||||||| | || || || | |||||||||||||| ||||||
Sbjct 153044 TTAGAGACGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 153103
Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686
|| |||| ||||| ||||| || || | || || | |||| |
Sbjct 153104 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 153163
Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746
||||| ||| ||| || || || || ||||| ||||||||||| ||||||
Sbjct 153164 GAGGAAGTCAGCGAGCTCTATCAGCGAACGTTGAGCATACGACCGAAGTTGATTGAGCTC 153223
Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTTTAC----GCGAATTTGTGTG 802
|||| || ||||| ||||| ||||| || | || | | | ||| ||
Sbjct 153224 ATTGCTCGATACTCGCAGAAGAAAGGTAA-TGTATTCATATTCATCTACGA--CCATGGC 153280
Query 803 TTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCA 862
||||| | | ||| |||||||| |||||||| | || || ||||||||||||||
Sbjct 153281 TTGGCTAAT----GTGCACCAGATGACTTCACGCAATTGAATGAAAAGTTCATCAAGGCG 153336
Query 863 CGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|| |||||||||||| | | || ||| ||||||||||||||||
Sbjct 153337 CGGCGCGACTACGAAGCTTTGCTCGAATCCTCGATGTCGCAACC 153380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944983129515
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |