Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq87 275 2e-70 >seq87 Length=2195358 Score = 275 bits (304), Expect = 2e-70 Identities = 378/525 (72%), Gaps = 25/525 (5%) Strand=Plus/Plus Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || || || || |||||||| | || || || ||||||||| |||||||| || | Sbjct 1864327 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 1864386 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 ||||| |||||||| | |||||||| ||||||||||||||||| ||| || | ||| Sbjct 1864387 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 1864446 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 ||||| || || ||||| || || ||||| |||||| | ||||| || |||||||||||| Sbjct 1864447 CAGACTGGAATATTCCCGCTGAATTATGTTGAGAAGATCCAGGACCCAACCAAGGAGGAG 1864506 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 | ||||| || || ||||||||| | || || || | |||||||||||||| |||||| Sbjct 1864507 TTAGAGAGGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 1864566 Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686 || |||| ||||| ||||| || || | || || | |||| | Sbjct 1864567 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 1864626 Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746 ||||| ||| ||| || || ||| || ||||| ||||||||||| |||||| Sbjct 1864627 GAGGAAGTCAGCGAGCTCTATCAGCGGACGTTGAGCATACGACCGAAGTTGATTGAGCTC 1864686 Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAA-GT----GGAATCTTTTACGCGAATTTGTGT 801 |||| || ||||| ||||| ||||| || | || | |||| | || Sbjct 1864687 ATTGCTCGATACTCGCAGAAGAAAGGTAATGTATTCACATTCATCTACGACCA----TGA 1864742 Query 802 GTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGC 861 ||||| | | ||| |||||||| ||||||||| | || ||||||||||||||||| Sbjct 1864743 CTTGGCTAAT----GTGCACCAGATGACTTCACGCAGTTGAATGAGAAGTTCATCAAGGC 1864798 Query 862 ACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || |||||||||||| | | || ||| |||||||||||||||| Sbjct 1864799 GCGGCGCGACTACGAAGCTTTGCTAGAATCCTCGATGTCGCAACC 1864843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945569653530