Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07-
28] 605 sequences; 31,102,602 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq44 275 2e-70
>seq44
Length=499379
Score = 275 bits (304), Expect = 2e-70
Identities = 378/525 (72%), Gaps = 25/525 (5%)
Strand=Plus/Minus
Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458
|| || || || |||||||| | || || || ||||||||| |||||||| || |
Sbjct 417730 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 417671
Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518
||||| |||||||| | |||||||| ||||||||||||||||| ||| || | |||
Sbjct 417670 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 417611
Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578
||||| || || ||||| || || ||||| |||||| | ||||| || ||||||||||||
Sbjct 417610 CAGACTGGAATATTCCCGCTGAATTATGTTGAGAAGATTCAGGACCCAACCAAGGAGGAG 417551
Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
| ||||| || || ||||||||| | || || || | |||||||||||||| ||||||
Sbjct 417550 TTAGAGAGGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 417491
Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686
|| |||| ||||| ||||| || || | || || | |||| |
Sbjct 417490 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 417431
Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746
||||| ||| ||| || || ||| || ||||| ||||||||||| ||||||
Sbjct 417430 GAGGAAGTCAGCGAGCTCTATCAGCGGACGTTGAGCATACGACCGAAGTTGATTGAGCTC 417371
Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAA-GT----GGAATCTTTTACGCGAATTTGTGT 801
|||| || ||||| ||||| ||||| || | || | |||| | ||
Sbjct 417370 ATTGCTCGATACTCGCAGAAGAAAGGTAATGTATTCACATTCATCTACGACCA----TGA 417315
Query 802 GTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGC 861
||||| | | ||| |||||||| ||||||||| | || |||||||||||||||||
Sbjct 417314 CTTGGCTAAT----GTGCACCAGATGACTTCACGCAGTTGAATGAGAAGTTCATCAAGGC 417259
Query 862 ACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|| |||||||||||| | | || ||| ||||||||||||||||
Sbjct 417258 GCGGCGCGACTACGAAGCTTTGCTAGAATCCTCGATGTCGCAACC 417214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945494484975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |