Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07- 28] 605 sequences; 31,102,602 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq44 275 2e-70 >seq44 Length=499379 Score = 275 bits (304), Expect = 2e-70 Identities = 378/525 (72%), Gaps = 25/525 (5%) Strand=Plus/Minus Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || || || || |||||||| | || || || ||||||||| |||||||| || | Sbjct 417730 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 417671 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 ||||| |||||||| | |||||||| ||||||||||||||||| ||| || | ||| Sbjct 417670 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 417611 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 ||||| || || ||||| || || ||||| |||||| | ||||| || |||||||||||| Sbjct 417610 CAGACTGGAATATTCCCGCTGAATTATGTTGAGAAGATTCAGGACCCAACCAAGGAGGAG 417551 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 | ||||| || || ||||||||| | || || || | |||||||||||||| |||||| Sbjct 417550 TTAGAGAGGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 417491 Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686 || |||| ||||| ||||| || || | || || | |||| | Sbjct 417490 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 417431 Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746 ||||| ||| ||| || || ||| || ||||| ||||||||||| |||||| Sbjct 417430 GAGGAAGTCAGCGAGCTCTATCAGCGGACGTTGAGCATACGACCGAAGTTGATTGAGCTC 417371 Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAA-GT----GGAATCTTTTACGCGAATTTGTGT 801 |||| || ||||| ||||| ||||| || | || | |||| | || Sbjct 417370 ATTGCTCGATACTCGCAGAAGAAAGGTAATGTATTCACATTCATCTACGACCA----TGA 417315 Query 802 GTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGC 861 ||||| | | ||| |||||||| ||||||||| | || ||||||||||||||||| Sbjct 417314 CTTGGCTAAT----GTGCACCAGATGACTTCACGCAGTTGAATGAGAAGTTCATCAAGGC 417259 Query 862 ACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || |||||||||||| | | || ||| |||||||||||||||| Sbjct 417258 GCGGCGCGACTACGAAGCTTTGCTAGAATCCTCGATGTCGCAACC 417214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945494484975