Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq7198 250 8e-63 >seq7198 Length=1552351 Score = 250 bits (276), Expect = 8e-63 Identities = 372/524 (71%), Gaps = 23/524 (4%) Strand=Plus/Plus Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || || || || |||||||| | || || || ||||||||| |||||||| || | Sbjct 587114 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 587173 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 ||||| |||||||| | |||||||| ||||||||||||||||| ||| || | ||| Sbjct 587174 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 587233 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 ||||| || || ||||| || || || || |||||| | ||||| || || ||||||||| Sbjct 587234 CAGACTGGAATATTCCCGCTGAATTACGTTGAGAAGATCCAGGACCCAACTAAGGAGGAG 587293 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 | |||| || || ||||||||| | || || || | |||||||||||||| |||||| Sbjct 587294 TTAGAGACGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 587353 Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686 || |||| ||||| ||||| || || | || || | |||| | Sbjct 587354 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 587413 Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746 ||||| ||| ||| || || || || ||||| ||||||||||| |||||| Sbjct 587414 GAGGAAGTCAGCGAGCTCTATCAGCGAACGTTGAGCATACGACCGAAGTTGATTGAGCTC 587473 Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTTTAC----GCGAATTTGTGTG 802 |||| || ||||| ||||| ||||| || | || | | | ||| || Sbjct 587474 ATTGCTCGATACTCGCAGAAGAAAGGTAA-TGTATTCATATTCATCTACGA--CCATGGC 587530 Query 803 TTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCA 862 ||||| | | ||| |||||||| |||||||| | || || |||||||||||||| Sbjct 587531 TTGGCTAAT----GTGCACCAGATGACTTCACGCAATTGAATGAAAAGTTCATCAAGGCG 587586 Query 863 CGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || |||||||||||| | | || ||| |||||||||||||||| Sbjct 587587 CGGCGCGACTACGAAGCTTTGCTCGAATCCTCGATGTCGCAACC 587630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944258651145