Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq7198 250 8e-63
>seq7198
Length=1552351
Score = 250 bits (276), Expect = 8e-63
Identities = 372/524 (71%), Gaps = 23/524 (4%)
Strand=Plus/Plus
Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458
|| || || || |||||||| | || || || ||||||||| |||||||| || |
Sbjct 587114 GTGCGTGCACTGTACGACTTTGCCCCATCCGAGCCCGGCGAGCTGGCTTTCAAAAAGAAC 587173
Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518
||||| |||||||| | |||||||| ||||||||||||||||| ||| || | |||
Sbjct 587174 GACATCATTGCGGTATTGGAGTCTGTATACAAGGACTGGTGGAAAGGTAGCCTTAGAGGA 587233
Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578
||||| || || ||||| || || || || |||||| | ||||| || || |||||||||
Sbjct 587234 CAGACTGGAATATTCCCGCTGAATTACGTTGAGAAGATCCAGGACCCAACTAAGGAGGAG 587293
Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
| |||| || || ||||||||| | || || || | |||||||||||||| ||||||
Sbjct 587294 TTAGAGACGGATGCGCAGATGGAGTCCGAGGTGTTCGGTGAGATCAAGAACGTTGAGAAG 587353
Query 639 CTGCTAGCTCTGCT--------GAGCACTAG--TTCGAGTGCCGACGCTA--GGGACAAT 686
|| |||| ||||| ||||| || || | || || | |||| |
Sbjct 587354 CTCTTAGCGCTGCTCAGCGTCGGAGCAGAAGGAGGCGGCAGGAGAGGCGAGCGGGAAGAA 587413
Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746
||||| ||| ||| || || || || ||||| ||||||||||| ||||||
Sbjct 587414 GAGGAAGTCAGCGAGCTCTATCAGCGAACGTTGAGCATACGACCGAAGTTGATTGAGCTC 587473
Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTTTAC----GCGAATTTGTGTG 802
|||| || ||||| ||||| ||||| || | || | | | ||| ||
Sbjct 587474 ATTGCTCGATACTCGCAGAAGAAAGGTAA-TGTATTCATATTCATCTACGA--CCATGGC 587530
Query 803 TTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCA 862
||||| | | ||| |||||||| |||||||| | || || ||||||||||||||
Sbjct 587531 TTGGCTAAT----GTGCACCAGATGACTTCACGCAATTGAATGAAAAGTTCATCAAGGCG 587586
Query 863 CGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|| |||||||||||| | | || ||| ||||||||||||||||
Sbjct 587587 CGGCGCGACTACGAAGCTTTGCTCGAATCCTCGATGTCGCAACC 587630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944258651145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |